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Question: Your favorite bioinformatics blogs (March 2010)
 
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I think that for a professional is very important to follow blogs focused on his own speciality, it is a good way to learn without too much effort and to stay updated. Which bioinformatics-related blogs do you usually read?

note: there is a similar question posted on stackoverflow.

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ok, I have changed the title to the plural form: "blogs" instead of "blog". So, provide us all your favorite links! :-)

log in to reply • written 2.2 years ago by Giovanni M Dall'Olio  14,22041837
 

Why is this tagged off-topic? Can somebody explain this, please.

log in to reply • written 16 months ago by Michael Dondrup ♦♦ 20,13011130

31 answers

 
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Blogs:

Moreover, I also find useful to follow the blogs from many bioinformatics services or databases:

 
 
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Shameless plug for the bioinformatics subreddit (of which I am a moderator).

 

Since this was chosen as the top answer, I've added a link to BioStar in the sidebar of the bioinformatics subreddit.

log in to reply • written 3.2 years ago by Jeroen Van Goey  1,750314
 

Thank you that's really nice.

log in to reply • written 3.2 years ago by Istvan Albert ♦♦ 31,62021535
 
 
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A friend of mine is a very active blogger in bioinformatics. This is his blog site

Fisheye Perspective

He has also complied a list of bioinformatics and chemo informatics blogs which are very popular. some of you might be interested in it.

30+ Blogs about Bioinformatics and Chemoinformatics Programming

 

Abhishek's is one of the bests :-)

log in to reply • written 3.2 years ago by Giovanni M Dall'Olio  14,22041837
 

That is a good list

log in to reply • written 3.2 years ago by Michael Barton  1,680315
 
 
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mine of course ! :-) http://plindenbaum.blogspot.com

See also: Bioinformatics blogs on Nature-blogs: http://blogs.nature.com/blogs?tags=bioinformatics

And the life-scientists group on FriendFeed: http://friendfeed.com/the-life-scientists

 
 
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There are so many great blogs out there, I love Openhelix blog, and many others already listed. But reading all blogs takes ages, though I have everything fed into my Google Reader.

That's the reason why last week we started our new community-based project biotricks.net, which is a meta-blog linking out to interesting tips, tricks, and tools for bioinformaticians but also hosts own articles, scripts, code lines, etc.

At the moment it is quite basic, but like BioStar it will become more interesting the more people are using it.

So please support and contribute to this project. Thanks.

http://www.biotricks.net

 

I linked it on the bioinformatics subreddit (http://redd.it/i64rn). Hopefully it will get some exposure there. Success with the project!

log in to reply • written 23 months ago by Jeroen Van Goey  1,750314
 

Good one. Bookmarked it.

log in to reply • written 23 months ago by Woa  1,68028
 

Great, Jeroen. Thanks for that. Thumbs up for you guys. Thanks for the support.

log in to reply • written 23 months ago by Thomas Schwarzl  19014
 
 
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eheh :-) this sounds familiar...

log in to reply • written 3.2 years ago by Giovanni M Dall'Olio  14,22041837
 

Hi everyone, slightly unrelated note. Remember to vote on posts, questions if you like them. That is the way to accumulate reputation that in the end allows the users to moderate content (see FAQ for more info). Also it is recommended to select the best answer for a question.

log in to reply • written 3.2 years ago by Istvan Albert ♦♦ 31,62021535
 
 
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Here is one that I follow, but I'm interested in adding more blogs to my feed:

 
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Second that. Good one for python

log in to reply • written 3.2 years ago by Michael Barton  1,680315
 

agreed, brad does interesting stuff.

log in to reply • written 3.1 years ago by brentp  14,94011437
 
 
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Getting genetics done, covers more than just bioinformatics and is a bit heavy on the GWAS but overall is a well-done blog.

 
 
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Very large list of bioinformatics blogs from the now defunct Nodalpoint wiki

 
 
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Shameless plug for the OpenHelix blog. We talk about databases and resources in genomics/bioinformatics for the end user/experimental biologist, have tips of the week, etc.

In addition to some mentioned above, I like business|bytes|genes|molecules

 

Very useful for graduate students (and bioinformatics librarians)

log in to reply • written 2.7 years ago by Natalie  0
 

Jap, it's also my favourite too

log in to reply • written 2.7 years ago by Markus Krupp  805
 
 
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Maybe not The Greatest but these few are covering next gen sequencing:

http://www.massgenomics.org/

http://www.fejes.ca/labels/DNA.html

http://omicsomics.blogspot.com/

 

For bioinformatics for cancer research, Dan's blog is very up to date and presented extremely well.

log in to reply • written 10 months ago by Vivek  1105
 
 
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I like the OpenHelix Blog. :D

http://blog.openhelix.eu/

 
 
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Your blog has been voted among the top 15 Bioinformatics blogs in 2010. Congrats!

log in to reply • written 3.2 years ago by Istvan Albert ♦♦ 31,62021535
 

Many thanks! Manuel

log in to reply • written 3.2 years ago by Manuel Corpas  59014
 
 
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A lot has been written above, so I'll add something different. One reason to follow a blog is to be a part of the conversation or simply to "listen in." This is why we go to conferences. And so, I think that one should also be on Twitter in order to do the same - listen and add to the conversation. Clearly, Twitter and a blog are different formats and come to you in different ways, but they are both useful tools in getting you connected to other people and their ideas, as well as putting yourself into the conversation.

@larry_parnell varigenome.blogspot.com

 
 
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Hi, I found some interesting posts on http://www.biotricks.net/ The blog is quite new, and there are many interesting guides, for beginners and the curious. Definitively will keep following it!

 
 
 
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Well, more than "favourite" blog I can list the ones I like (this is, the ones that passed the filter and I'm still following). Apart from Giovanni's and Pierre's, and other more technical blogs already mentioned, I'm interested in the sequencing technologies, personal genomes and publication ethics. This is then my small list:

http://nsaunders.wordpress.com/ - Bioinformatics and other stuff

http://cameronneylon.net/ - On communicating science

http://www.genomesunzipped.org/ - On personalized Genomics

Can't help to add a shameless plug to our group's blog on Computational OncoGenomics: http://bg.upf.edu/blog/

 

thank you Alba!! I saw your blog a while ago but I didn't notice that now you have started blogging on it actively. I will add it to my rss feeder :-)

log in to reply • written 2.2 years ago by Giovanni M Dall'Olio  14,22041837
 
 
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I just remembered this--there's a good thread on blogs in this arena from the SEQanswers forum:

http://seqanswers.com/forums/showthread.php?t=5024

 
 
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I am quite keen of some of the in-depth blogs about metabolomics, such as this blog by Gilleain around metabolite identification.

 
 
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My little contribution to the Bioinformatics Field: http://www.bioinformatics.fr

 
 
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http://jeffreyliu99.blogspot.com : A good blog for proteomics

log in to reply • written 2.0 years ago by Woa  1,68028
 
log in to reply • written 13 months ago by Woa  1,68028
 
 
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As WoA Nicely put: the Macromolecular Modeling Blog other related blogs I read (but don't write at): sort of ranked by relevance to structural bioinformatics:

Some update more routinely than others.. What other computational structural biology blogs you know ?

 
 
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http://www.biotricks.net/ is definitely worthwhile to try.

 
 
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We started a blog at http://www.homolog.us to write on transcriptomics and next-gen sequencing. Here is a brief description of our objectives.

 
 
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This one has just started but contains interesting media files and source code:

http://bio-tools.org/

 
 
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I like Getting Genetics Done available here: http://gettinggeneticsdone.blogspot.com/

 
 
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Every thing and anything related to Bioinformatics ...Jobs in Bioinformatics, Bio Java, Bio Ruby, Sequencing, Free Downloads, Video tutorials http://amitvikram-bioinformatics.blogspot.com/

 
 
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Biocoders.net is actually mine, additionnaly to a being a blog i am using it as a strong online collaboration tool, synchronizing my social networks with it, it is :

Facebook Linkedin Twitter Github Sourcefoge

Like all in one web app.

Rad

 
 
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i really like post ...i read this post with full interest and it is informative too...thanks for sharing this information with us and also provide complete information about bio informatics

 

thanks, but please don't put comments as new answers here. If you have a commentary on a question, use the 'add comment' link.

log in to reply • written 2.7 years ago by Giovanni M Dall'Olio  14,22041837
 
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