56 minutes ago by
mathavanbioinfo
▴
90
1
vote
0
replies
23
views
0
votes
1
reply
123
views
795
votes
167
replies
141k
views
109 follow
updated 12 weeks ago by
Biostar
2.6k
•
written 7.4 years ago by
Istvan Albert
100k
1
vote
1
reply
135
views
0
votes
0
replies
70
views
updated 4 hours ago by
Ram
43k
•
written 9 hours ago by
Bioinformatician
•
0
0
votes
1
reply
151
views
updated 9 hours ago by
GenoMax
141k
•
written 11 hours ago by
rebecca.calvo
•
0
0
votes
0
replies
102
views
0
votes
3
replies
274
views
1
vote
4
replies
367
views
what's the genomic location and name of gene responsible for orange and black patches in calico cats
updated 11 hours ago by
Matthias Zepper
4.5k
•
written 13 hours ago by
Ann
★
2.4k
0
votes
0
replies
84
views
0
votes
0
replies
95
views
14 hours ago by
Nitin
•
0
1
vote
5
replies
398
views
0
votes
0
replies
101
views
0
votes
0
replies
89
views
15 hours ago by
Rodolfo Adrián
•
0
3
votes
8
replies
1.0k
views
0
votes
1
reply
159
views
0
votes
0
replies
107
views
1
vote
5
replies
567
views
updated 16 hours ago by
BioinfGuru
★
1.7k
•
written 1 day ago by
rrehimi
•
0
0
votes
0
replies
93
views
17 hours ago by
DanielEB_fisk
▴
20
0
votes
1
reply
182
views
4
votes
9
replies
2.6k
views
Tool:
CANEapp, a user-friendly application for automated next generation transcriptomic data analysis
written 8.2 years ago by
dvelmeshev
•
0
2
votes
7
replies
5.2k
views
6 follow
updated 18 hours ago by
ATpoint
81k
•
written 7.1 years ago by
boymin2020
▴
80
4
votes
11
replies
749
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
updated 5 hours ago by
Ram
43k
•
written 19 hours ago by
BioinfGuru
★
1.7k
1
vote
1
reply
329
views
20 hours ago by
Dinmukhamed
•
0
0
votes
0
replies
112
views
updated 16 hours ago by
Ram
43k
•
written 20 hours ago by
Dinmukhamed
•
0
0
votes
0
replies
114
views
1
vote
2
replies
385
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
rahu
•
0
0
votes
0
replies
122
views
updated 16 hours ago by
Ram
43k
•
written 1 day ago by
atharvakarkare14
▴
10
7
votes
3
replies
2.7k
views
updated 1 day ago by
colindaven
6.3k
•
written 15 months ago by
Dr.Animo
▴
130
3
votes
3
replies
308
views
0
votes
2
replies
430
views
0
votes
3
replies
330
views
11
votes
12
replies
809
views
0
votes
0
replies
134
views
updated 1 day ago by
GenoMax
141k
•
written 1 day ago by
N.Y.Wiyana-Hewage
•
0
0
votes
2
replies
295
views
0
votes
2
replies
289
views
1 day ago by
Ashok
•
0
0
votes
2
replies
321
views
1 day ago by
Ashok
•
0
5
votes
2
replies
387
views
updated 1 day ago by
shelkmike
★
1.2k
•
written 1 day ago by
kirillkirilenko
▴
40
0
votes
0
replies
141
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
samuelkalandarov2002
•
0
1
vote
1
reply
297
views
0
votes
2
replies
337
views
16 hours ago by
_quantum_girl_
▴
10
0
votes
0
replies
144
views
1
vote
4
replies
625
views
0
votes
0
replies
140
views
1 day ago by
enferdeflame
•
0
0
votes
0
replies
153
views
0
votes
0
replies
154
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
carlopecoraro2
★
2.5k
1
vote
9
replies
690
views
updated 1 day ago by
Elisabeth Gasteiger
★
2.4k
•
written 1 day ago by
Jacky
•
0
0
votes
1
reply
230
views
0
votes
1
reply
244
views
0
votes
0
replies
157
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
carlopecoraro2
★
2.5k
Recent Votes
Recent Locations •
All
Germany, just now
Machhagan, 1 minute ago
Netherlands, 2 minutes ago
Bologna, 3 minutes ago
Frankrike, 11 minutes ago
Greece, 24 minutes ago
WCIP | Glasgow | UK, 27 minutes ago
Recent Awards •
All
Popular Question to
Rodolfo Adrián
•
0
Scholar to
damian.szk
▴
70
Popular Question to
alphaflylizard
•
0
Popular Question to
Shicheng Guo
★
9.4k
Popular Question to
DanielEB_fisk
▴
20
Recent Replies
Comment: Free/open source 23andme-like analysis
by
swbarnes2
14k
Accurately assessing a few QC metrics is trivially easy.
Assessing the significance of variants in a clinically responsible way is really…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
swbarnes2
14k
If _1 and _2 really are the same library, you should rename the fastqs, or make symlinks, such that they have the same sample name, but dif…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
ATpoint
81k
Just delete the index read files. They just take up space and will never be used.
Comment: Adding CB tag to bam file
by
swbarnes2
14k
Yes. Why wouldn't you use, say, AddOrReplaceReadsGroups?
Comment: Ciriquant not configuring hisat2 indexed files
by
Atul K.
•
0
Thank you. Decreased the threads to 2 (changed the threads: 2 in the config file; but it was somehow using 4). It did run for sometime but …
Answer: GTF file from Stringtie to R Studio for either Ballgown or DESeq2
by
Ram
43k
See this section on how to use tximport to import StringTie output for DESeq2 processing: https://bioconductor.org/packages/devel/bioc/vign…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Can you explain the normalization or give me a link that describes it, please? Comparison across samples will always be caveated as RNA-seq…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
Sorry, I see how harsh I come across. It's not good practice to use multiple versions of R in the same project. I can understand legacy pro…
Answer: MEGA Analysis Issue on High-Performance Computer
by
Mensur Dlakic
★
27k
> I have ensured that I am using the latest version of MEGA and that other applications are not consuming excessive resources during the an…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
Some of us are still learning and fall foul to knowledge limitation fairly regularly. Luckily we have people to put us in our place.
Answer: Running blastp with BLAST+ 2.15.0 against custom database; need to identify hits
by
GenoMax
141k
> I know that I should be able to collect protein sequences from the blastp results into a file, but I do not know how to do this.
You c…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
rheab1230
▴
140
I got the normalized gene count from gtex portal. they use inverse quantile normalization
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
Matthias Zepper
4.5k
It is not entirely off, but evidently also not correct.
Melanin biosynthesis is a multistep process, that indeed prominently involves the…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
> so a single Rscript could utilise multiple environments and versions
How is that sane, let alone "better"? Also, why use `snap` for curl…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Normalized how?
Traffic: 1593 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6