Question: Can we agree on a short twitter hashtag for NextGen Sequencing?
 
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There is no real consensus on a short, non-hijacked hashtag to use for "High-Througput sequencing" / "Next Generation Sequencing" on social media sites such as twitter and identi.ca. What I have seen mostly used is:

  • NextGenSequencing (too long)

  • NGS (hijacked)

... which tend to make them kind of useless.

So, can we please suggest/vote on different alternatives here? (Please one tag per answer, to allow for meaningful voting).

UPDATE Oct 20, 2011: By majority voting, #deepseq was the winner, so, let's see if we can get people to be using the #deepseq tag! (otherwise, we'll have to bring up the discussion again).

UPDATE Oct 21, 2011: I did withdraw the "correct answer" mark now, since there is two equal winners currently, and probably it doesn't really make sense for me to give a "correct answer", as consensus might change as more sees the poll, and it also comes up to what people will actually use on twitter. (Thanks for all the nice suggestions though, folks!)

 
 
 

I don't mind getting the odd #NGS tagged post about the National Gardens Scheme http://http://ngs.org.uk/ ... other than that the "hijacking" hasn't been too bad.

log in to reply • written 7 months ago by Peter  17228
 

OK, it does seem to have got worse of later. The nature of Twitter hastags :(

log in to reply • written 7 months ago by Peter  17228
 

And the tag goes to...?

log in to reply • written 6 months ago by David  74
 

... to #deepseq

log in to reply • written 6 months ago by Samuel Lampa  5918
 
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I do not use Twitter, so this question is less relevant to me. But #deepseq seems too limited to me. There are a lot more we can do with NGS.

log in to reply • written 6 months ago by lh3  11741223
 

Well, I tend to agree actually ... but hmm ... I was looking for a community consensus, so ... hmm ...

log in to reply • written 6 months ago by Samuel Lampa  5918
 

Calling #deepseq as the majority preference may have been premature (and I don't like it either).

log in to reply • written 6 months ago by Peter  17228
 

Not that I care about this issue personally, but stating what is majority preference depends on how you calculate it - including or excluding downvotes?

log in to reply • written 6 months ago by Casey Bergman  123921131
 
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On BioStar people vote for nice answers not for hashtags. Casey's answer may even have gotten extra votes because he agreed to like another answer more himself. If you want to vote I think you should use twitter and see which hashtag gets most (re)tweets.

log in to reply • written 6 months ago by Chris Evelo  804722
 

I'm redrawing the "correct answer" mark now, since there is two equal winners currently. I don't even know if it makes sense for me to give a "correct answer". As Chris states above, it's more about what people will actually start using on twitter ...

log in to reply • written 6 months ago by Samuel Lampa  5918
 

(And as Casey is hinting at as well ... being hard to make a fair choice)

log in to reply • written 6 months ago by Samuel Lampa  5918
 

(And as Casey is hinting at as well ... being hard to make a fair choice) .... and @Peter: Yeah, I was obviously a bit quick there.

log in to reply • written 6 months ago by Samuel Lampa  5918
 

I have not used twibes much, but gave a go to this ngs twibe .. so any tweet with #ngs from a member, gets logged in the twibe which i think is cool thoughts from others on that being workable? http://www.twibes.com/group/ngs

why did you say #NGS is hijacked?

log in to reply • written 6 months ago by Bioinfosm  273
 

Maybe things have improved ... at the time when I posted this, there were lots of noise for the #NGS hashtag.

log in to reply • written 5 months ago by Samuel Lampa  5918

7 answers

 
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how about #deepseq, since we are already beyond NGS and onto next-NGS, so "next" generation sequencing is something of dated term, while deep sequencing will be with us for many years to come.

 
 
 
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I agree +1, but still see "NextGen" everywhere that this term will not soon be banished from the lexicon.

log in to reply • written 7 months ago by Larry_Parnell  1320722
 

Nonsense; the term Next Generation Sequencing" is as timeless as "New Wave Music".

log in to reply • written 7 months ago by Gareth Palidwor  14218
 
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not necessarily all studies deepseq, nor is PACBIO deep at the moment - but other than these, great word

log in to reply • written 7 months ago by Haibao Tang  198210
 

As Alastair Kerr's post hints at, there's just so many types of "seq", and as mentioned above, not all "seq" is even very "deep", so I wonder whether "bio" wouldn't be the "least common denominator", so "#bioseq"?

log in to reply • written 7 months ago by Samuel Lampa  5918
 

As Alastair Kerr's post hints at, there's just so many types of "seq", and as mentioned above, not all "seq" is even very "deep", so I wonder whether "bio" wouldn't be the "least common denominator", so "#bioseq"? (Feel free to add if anybody else likes it. Don't like answernig own q)

log in to reply • written 7 months ago by Samuel Lampa  5918
 

Ok, majority seems to be quite clear about this one, so here goes the mark!

log in to reply • written 6 months ago by Samuel Lampa  5918
 

... so, let's see if we can get people to be using the #deepseq tag! (otherwise, we'll have to bring up the discussion again)

log in to reply • written 6 months ago by Samuel Lampa  5918
 

(Have withdrawn as correct answer. Not planning to give mark from here on. See update on main post for details)

log in to reply • written 6 months ago by Samuel Lampa  5918
 
 
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A shorter tag is better and so I would offer #NGSeq. There are only 2 Tweets for this tag as of this moment.

 
 
 

I tend to think this one is the most realistic at the moment ... would imagine 99% of folks to look for something around "NextGen" when searching for the right tag ...

log in to reply • written 7 months ago by Samuel Lampa  5918
 

I tend to think this one is the most realistic at the moment ... would imagine 99% of folks to look for something around "NextGen" when searching for the right tag ... I mean, maybe it's a too big task to both change the accepted term of use, and the twitter tag, both at the same time?

log in to reply • written 7 months ago by Samuel Lampa  5918
 
 
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Since none of them makes us happy or even smile... What about #GATACA? The movie (entitled GATTACA) doesn't cause that much noise, and it is easy to remember since it is different from everything you thought it might be. I know it doesn't discriminate from Sanger sequencing, but how often do you need that as a hashtag anyway.

 
 
 
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Nice idea: perhaps even #GATC would be suitably abstract

log in to reply • written 7 months ago by Alastair Kerr  347411
 
 
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HTSeq as suggested improvement over #HTS

 
 
 
 
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I think #HTS (=High Throughput Seq) is easy enough :-)

 
 
 

+1 I think Peter's suggestion is better since it also avoids 'next" in fewer characters.

log in to reply • written 7 months ago by Casey Bergman  123921131
 
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Unfortunately there seems to be a lot of noise for #hts on twitter (see http://twitter.com/#!/search/%23hts ), but how about #htseq?

log in to reply • written 7 months ago by Samuel Lampa  5918
 

If anybody else likes it (HTSeq), feel free to add as a proper answer (Don't like to answer my own questions, and it was not really my idea anyway, just a variation on Peters').

log in to reply • written 7 months ago by Samuel Lampa  5918
 

yeah the #hts seems really busy on twitter, #htseq seems to be the much better option.

log in to reply • written 7 months ago by Peter  254
 
 
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My proposal is #NextGenSeq

 
 
 
 
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Over the last few years my core facility has not dealt with that much data derived from Sanger sequencing. I guess that this is quite common trend. I tried looking for hashtags based on sanger sequencing without much luck.

So how about just #DNASeq?

However even that may not be all that useful in future. The problems I face with all the different applications of non-sanger sequencing (ChipSeq, MAPSeq, RNASeq, miRNASEQ, epigenetics, denovo assembly) and different technologies (HiSeq, PacBio ..) can be quite unique to each application or tech. Indeed some of our 'deep' sequencing projects are not all that deep (whether they should be is a different matter...).

Would an ontology or controlled vocabulary of tweet tags work? Perhaps too complicated but worth considering.

 
 
 
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Heh, yeah, quite many kinds of sequencing. "Sequencing" alone is not a good term either, since it appears in audio processing communities ... but what about #BioSeq then? :)

log in to reply • written 7 months ago by Samuel Lampa  5918
 

If anybody else likes it (BioSeq), feel free to suggest. I don't like to answer my own questions (and it was not completely my idea anyway, was actually inspired by DNASeq suggestion).

log in to reply • written 7 months ago by Samuel Lampa  5918
 

If anybody else likes it (BioSeq), feel free to add as a proper answer (Don't like to answer own question, and was not really my idea anyway, but inspired by "DNASeq")

log in to reply • written 7 months ago by Samuel Lampa  5918
 

But #DNASeq doesn't include RNA-Seq for transcriptomes etc.

log in to reply • written 7 months ago by Peter  17228
 
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