5
votes
2
replies
1.0k
views
5
votes
12
replies
783
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
1 hour ago by
BioinfGuru
★
1.7k
5
votes
2
replies
1.7k
views
5
votes
4
replies
2.8k
views
updated 3 days ago by
hamarillo
▴
70
•
written 5.6 years ago by
silviajserrano
▴
50
5
votes
3
replies
687
views
4
votes
7
replies
4.5k
views
updated 4 days ago by
进
•
0
•
written 3.9 years ago by
Peter Chung
▴
200
4
votes
7
replies
527
views
4
votes
0
replies
169
views
4
votes
6
replies
404
views
updated 4 days ago by
b.contreras.moreira
▴
160
•
written 5 days ago by
Begonia_pavonina
▴
150
4
votes
6
replies
3.9k
views
4
votes
6
replies
1.4k
views
4
votes
2
replies
3.7k
views
4
votes
2
replies
1.7k
views
4
votes
10
replies
1.5k
views
4
votes
5
replies
3.4k
views
4
votes
2
replies
297
views
4
votes
2
replies
240
views
4
votes
3
replies
2.2k
views
4
votes
4
replies
371
views
updated 5 days ago by
zx8754
11k
•
written 7 days ago by
emilija.romic
▴
10
4
votes
4
replies
2.6k
views
4
votes
9
replies
2.6k
views
Tool:
CANEapp, a user-friendly application for automated next generation transcriptomic data analysis
written 8.2 years ago by
dvelmeshev
•
0
4
votes
13
replies
789
views
updated 3 days ago by
BioinfGuru
★
1.7k
•
written 8 days ago by
matteo.levorato
•
0
3
votes
5
replies
2.1k
views
3
votes
3
replies
463
views
1 day ago by
SeoGyun
•
0
3
votes
2
replies
2.1k
views
3
votes
8
replies
4.9k
views
3
votes
8
replies
4.1k
views
3
votes
5
replies
1.8k
views
3
votes
4
replies
351
views
updated 6 days ago by
Pierre Lindenbaum
161k
•
written 7 days ago by
Sony
▴
10
3
votes
3
replies
3.0k
views
updated 1 day ago by
Ram
43k
•
written 7.9 years ago by
James Ashmore
★
3.4k
3
votes
6
replies
2.4k
views
3
votes
2
replies
4.1k
views
3
votes
3
replies
385
views
3
votes
7
replies
1.0k
views
3
votes
4
replies
3.4k
views
3
votes
9
replies
699
views
updated 1 day ago by
Elisabeth Gasteiger
★
2.4k
•
written 2 days ago by
Jacky
•
0
3
votes
1
reply
6.1k
views
updated 3 days ago by
Ram
43k
•
written 3.3 years ago by
fouerghi20
▴
80
3
votes
7
replies
398
views
3
votes
2
replies
1.2k
views
updated 2 days ago by
Ram
43k
•
written 4.4 years ago by
baldissera152
▴
10
3
votes
6
replies
10k
views
updated 3 days ago by
Bioinfotec
▴
10
•
written 7.5 years ago by
nut_B
▴
10
3
votes
4
replies
3.8k
views
3
votes
6
replies
879
views
updated 3 days ago by
Ram
43k
•
written 3.7 years ago by
oakhamwolf
▴
20
3
votes
11
replies
5.9k
views
updated 3 days ago by
Ram
43k
•
written 6.4 years ago by
shania90.lk
▴
30
3
votes
4
replies
377
views
3
votes
2
replies
803
views
3
votes
6
replies
8.3k
views
3
votes
2
replies
1.0k
views
3
votes
5
replies
447
views
3
votes
6
replies
4.0k
views
Recent Votes
Recent Locations •
All
Australia, 1 minute ago
United States, 1 minute ago
Pakistan, 10 minutes ago
Mt. Pleasant, MI, 17 minutes ago
Switzerland, 17 minutes ago
Russia, 19 minutes ago
South Korea, 35 minutes ago
Recent Awards •
All
Popular Question to
Rodolfo Adrián
•
0
Scholar to
damian.szk
▴
70
Popular Question to
alphaflylizard
•
0
Popular Question to
Shicheng Guo
★
9.4k
Popular Question to
DanielEB_fisk
▴
20
Recent Replies
Comment: Calculate Radius of Gyration [python 3]
by
ndm1096
•
0
Hello Franco. I am very much new with bioinformatics but I have been tasked with studying the radius of gyration of a timeseries of a prote…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
That makes a lot more sense. Thank you.
Answer: Removing Illumina microarray probes with no expression HumanHT-12v4
by
Gordon Smyth
★
7.0k
Type
```
help("read.idat")
```
and read the example at the bottom of the page, which shows you how to set the `other$Detection` component o…
Comment: Free/open source 23andme-like analysis
by
swbarnes2
14k
Accurately assessing a few QC metrics is trivially easy.
Assessing the significance of variants in a clinically responsible way is really…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
swbarnes2
14k
If _1 and _2 really are the same library, you should rename the fastqs, or make symlinks, such that they have the same sample name, but dif…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
ATpoint
81k
Just delete the index read files. They just take up space and will never be used.
Comment: Adding CB tag to bam file
by
swbarnes2
14k
Yes. Why wouldn't you use, say, AddOrReplaceReadsGroups?
Comment: Ciriquant not configuring hisat2 indexed files
by
Atul K.
•
0
Thank you. Decreased the threads to 2 (changed the threads: 2 in the config file; but it was somehow using 4). It did run for sometime but …
Answer: GTF file from Stringtie to R Studio for either Ballgown or DESeq2
by
Ram
43k
See this section on how to use tximport to import StringTie output for DESeq2 processing: https://bioconductor.org/packages/devel/bioc/vign…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Can you explain the normalization or give me a link that describes it, please? Comparison across samples will always be caveated as RNA-seq…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
Sorry, I see how harsh I come across. It's not good practice to use multiple versions of R in the same project. I can understand legacy pro…
Answer: MEGA Analysis Issue on High-Performance Computer
by
Mensur Dlakic
★
27k
> I have ensured that I am using the latest version of MEGA and that other applications are not consuming excessive resources during the an…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
Some of us are still learning and fall foul to knowledge limitation fairly regularly. Luckily we have people to put us in our place.
Answer: Running blastp with BLAST+ 2.15.0 against custom database; need to identify hits
by
GenoMax
141k
> I know that I should be able to collect protein sequences from the blastp results into a file, but I do not know how to do this.
You c…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
rheab1230
▴
140
I got the normalized gene count from gtex portal. they use inverse quantile normalization
Traffic: 1446 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6