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87
votes
25
answers
14k
views
79 follow
25
answers
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 18 months ago by TriS2.4k • updated 8 days ago by ragsadhav0
18
votes
16
answers
8.5k
views
14 follow
16
answers
106
votes
14
answers
8.9k
views
70 follow
14
answers
Which Bioinformatic Friendly Pipeline Building Framework?
scripting written 3.0 years ago by Carlos Borroto1.4k • updated 12 days ago by Juke-34750
33
votes
9
answers
5.6k
views
13 follow
9
answers
T Cell Specific Gene Expression Data
gene written 6.7 years ago by pixie@bioinfo1.1k • updated 13 days ago by alexis.vandenbon20
128
votes
8
answers
7.6k
views
40 follow
8
answers
Forum: Advice For Newcomers To The Bioinformatics Field
bioinformatics forum written 3.6 years ago by Medhat6.0k • updated 5 days ago by Eslam Samir30
113
votes
7
answers
35k
views
101 follow
7
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 2.4 years ago by Obi Griffith14k • updated 17 days ago by Payal0
13
votes
7
answers
225
views
7 follow
7
answers
How to sequentially replace a string with numerical value?
genome qqman written 13 days ago by pedroamandrade20 • updated 12 days ago by Malcolm.Cook710
37
votes
6
answers
6.5k
views
17 follow
6
answers
Best Genome Browser To Look At Structural Variation Calls
written 4.4 years ago by William3.6k • updated 1 hour ago by graeme.grimes10
18
votes
6
answers
235
views
7 follow
6
answers
HISAT2 or Tophat2
alignment rna-seq written 14 days ago by Payal0 • updated 13 days ago by Charles Warden4.6k
135
votes
6
answers
4.5k
views
68 follow
6
answers
News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 7 weeks ago by Istvan Albert ♦♦ 69k • updated 2 hours ago by Diego40
28
votes
6
answers
423
views
8 follow
6
answers
Forum: Is going back to the wet lab worth it?
bioinformatics forum career advice wet lab written 28 days ago by ropolocan50 • updated 27 days ago by i.sudbery970
201
votes
6
answers
5.1k
views
134 follow
6
answers
30
votes
5
answers
12k
views
12 follow
5
answers
Determine Transcription Factors For Genes
database transcription written 5.7 years ago by Joel140 • updated 1 day ago by krishna.ibioinfo0
19
votes
5
answers
2.4k
views
11 follow
5
answers
How to start Bioinformatics ?
genome sequence written 2.8 years ago by Eslam Samir30
5
votes
5
answers
281
views
8 follow
5
answers
RNAseq read depth
next-gen rna-seq sequencing written 5 weeks ago by bakerjh1020 • updated 11 days ago by apa@stowers320
11
votes
5
answers
21k
views
11 follow
5
answers
Converting Affymetrix Probes To Gene Ids
affymetrix conversion entrez written 3.6 years ago by Josh20 • updated 14 days ago by jananir18030
1
vote
5
answers
3.3k
views
5
answers
Addin gene information to VCF file
annotation next-gen variant snp written 2.1 years ago by ScienceBuff30 • updated 19 days ago by duke0
6
votes
5
answers
1.7k
views
8 follow
5
answers
Where Can I Download Pirna (Piwi Rnas) Of Mouse (Mm9)
written 3.3 years ago by biorepine1.2k • updated 18 days ago by aky31000
4
votes
5
answers
1.0k
views
5
answers
How to get mouse-human homologues table from UCSC?
genome gene alignment sequence written 19 months ago by ifudontmind_plzz70 • updated 14 days ago by macmath100
28
votes
5
answers
1.1k
views
10 follow
5
answers
A List Of Regular-Expressions For Recognizing Ids From Various Databases
database written 5.2 years ago by Will4.3k • updated 20 days ago by Dchoy20
8
votes
5
answers
207
views
8 follow
5
answers
Checking fastq is valid
next-gen sequencing written 13 days ago by flyamer30 • updated 13 days ago by apa@stowers320
13
votes
4
answers
2.4k
views
4
answers
How can I change the default path to which SRA files are downloaded?
rna-seq written 16 months ago by cacaucenturion2360 • updated 11 days ago by caritogandini0
1
vote
4
answers
174
views
4
answers
7
votes
4
answers
1.5k
views
5 follow
4
answers
How can I find SRA MD5 checksums for FASTQ files?
checksum sra md5 written 19 months ago by rivanov30 • updated 7 days ago by genomax221k
67
votes
4
answers
1.6k
views
17 follow
4
answers
Duplicates on Illumina
duplicates illumina written 20 days ago by predeus320 • updated 19 days ago by Brian Bushnell9.0k
2
votes
4
answers
720
views
6 follow
4
answers
How Many Chromosomes Have To Be Annotated For Human Beings?
chromosome written 4.6 years ago by Honglang Wang10 • updated 2 days ago by Brian Bushnell9.0k
6
votes
4
answers
5.7k
views
5 follow
4
answers
how to parse blast output using biopython
biopython blast written 2.8 years ago by camilla.borgonuovo10 • updated 11 days ago by Biostar ♦♦ 10
8
votes
4
answers
1.6k
views
5 follow
4
answers
how to rearrange fasta file according to its length
sequence forum next-gen written 17 months ago by akhilvbioinfo90 • updated 14 days ago by Brian Bushnell9.0k
6
votes
4
answers
199
views
6 follow
4
answers
Metrics to evaluate tree congruence
phylogeny software congruence written 18 days ago by fhsantanna220 • updated 8 days ago by Joseph Hughes1.9k
14
votes
4
answers
222
views
6 follow
4
answers
Run a Python program in Ubuntu
python ubuntu written 6 days ago by Ander40
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