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40
votes
21
answers
15k
views
27 follow
21
answers
Is There A List Of Top N Bioinformatics Or Genome Software Company Or Studio ?
genome software written 6.3 years ago by Gentle Yang200 • updated 1 hour ago by Biostar ♦♦ 20
285
votes
15
answers
14k
views
120 follow
15
answers
27
votes
9
answers
2.5k
views
11 follow
9
answers
I Work A Lot With Table-Like Structures, Should I Learn Sql?
perl R mysql written 4.2 years ago by enricoferrero720 • updated 15 hours ago by richardklause0
0
votes
4
answers
163
views
4
answers
False output when intersecting methylation data
multiintersect intersect wgbs written 2 days ago by theodore20 • updated 4 hours ago by Alex Reynolds20k
2
votes
3
answers
104
views
3
answers
Using Plink, get allele frequencies for a subset of individuals
individuals plink subset written 10 hours ago by Mr Locuace10 • updated 3 hours ago by pfs20
23
votes
3
answers
9.5k
views
13 follow
3
answers
Forward Stand Or Reverse Strand
read strand written 4.8 years ago by siyu100 • updated 11 hours ago by lucilepain0
0
votes
2
answers
449
views
2
answers
Lositan not opening - unsigned entry
lositan written 5 months ago by 178690670 • updated 4 hours ago by zhdang_19820
6
votes
2
answers
268
views
5 follow
2
answers
How many index files will be generated from hisat2-build
hisat2 rna-seq index written 3 months ago by Xiaokang ZH20 • updated 51 minutes ago by sxm8911140
3
votes
2
answers
80
views
2
answers
Bowtie2: gtf file - annotation file
gtf bowtie2 aligner written 12 hours ago by Jessica_bioinfo10 • updated 11 hours ago by Devon Ryan70k
2
votes
2
answers
414
views
2
answers
How to compare two files on the basis of Two IDs
perl written 12 months ago by Genomebiology0 • updated 17 hours ago by mittu160220
0
votes
2
answers
168
views
2
answers
findGenomeMotif.pl in Homer couldn't work properly
homer chip-seq written 28 days ago by xuenjun10 • updated 22 hours ago by toniford1250
2
votes
2
answers
138
views
2
answers
5
votes
2
answers
81
views
2
answers
How to perform KEGG pathway analysis in R?
kegg written 9 hours ago by MAPK1.0k • updated 8 hours ago by roy.granit600
0
votes
1
answer
83
views
1
answer
Recode SNPs dataset to Number
snp major allele minor allele recode snps written 17 hours ago by lailan.sahrina.hsb0 • updated 11 hours ago by pfs20
1
vote
1
answer
63
views
1
answer
Split RNA-seq reads
rna-seq written 5 hours ago by morteza.khabiri0 • updated 5 hours ago by Pierre Lindenbaum98k
0
votes
1
answer
72
views
1
answer
plink calculating LD using R2 command
plink ld r2 written 6 hours ago by janhuang.cn10 • updated 4 hours ago by pfs20
0
votes
1
answer
69
views
1
answer
How to convert gene symbol to ncbi UID
uid entrez written 7 hours ago by MAPK1.0k • updated 6 hours ago by Jean-Karim Heriche13k
0
votes
1
answer
58
views
1
answer
Working with Differentially Methylated Regions(DMRs)
dna methylation tcga dmrs minfi written 7 hours ago by noorpratap.singh10 • updated 7 hours ago by Kevin Blighe1.3k
0
votes
1
answer
66
views
1
answer
Cufflinks analysis of Tophat BAM file
alignment rna-seq written 8 hours ago by qudrat0 • updated 7 hours ago by Kevin Blighe1.3k
2
votes
1
answer
74
views
1
answer
Search set of SNPs on genome browser by rsid
genome genome browser written 6 hours ago by lordoftheowl0 • updated 5 hours ago by Pierre Lindenbaum98k
0
votes
1
answer
83
views
1
answer
How to interpret and trim this plots?
rna-seq written 16 hours ago by eyonesi0 • updated 16 hours ago by Michael Dondrup43k
3
votes
1
answer
96
views
1
answer
How many biological replicates needed for ChIP seq experiments?
chip chip-seq rna-seq written 16 hours ago by sakibthegreat0 • updated 13 hours ago by Rory Stark200
0
votes
1
answer
71
views
1
answer
groupism of disease ontology ID.
R written 14 hours ago by rajesh 10 • updated 14 hours ago by Jean-Karim Heriche13k
0
votes
1
answer
75
views
1
answer
split multiple fasta into codons
sequence written 19 hours ago by indrani.sarkar890 • updated 18 hours ago by Pierre Lindenbaum98k
0
votes
1
answer
68
views
1
answer
Citing data from GDC portal
gdc rna-seq tcga written 8 hours ago by noorpratap.singh10 • updated 8 hours ago by roy.granit600
1
vote
1
answer
93
views
1
answer
How to highlight multiple references mapped reads?
alignment written 17 hours ago by haro180 • updated 13 hours ago by Pierre Lindenbaum98k
0
votes
1
answer
115
views
1
answer
Family has no SP.. species CAFE message
cafe pyhlogeny gene expansion written 24 days ago by gu.fernandezn0 • updated 12 hours ago by Ben Fulton50
3
votes
1
answer
96
views
1
answer
Protein sequences please help.
genome sequence protein written 19 hours ago by arjahejo0 • updated 18 hours ago by Jean-Karim Heriche13k
0
votes
1
answer
72
views
1
answer
exon level quantification using htseq count
htseq-count exon quantifications rna-seq written 8 hours ago by komal.rathi2.9k • updated 7 hours ago by Devon Ryan70k
0
votes
1
answer
97
views
1
answer
ncRNA (lincRNA) in ribodepleted RNAseq
rna-seq written 23 hours ago by kanwarjag770 • updated 22 hours ago by Satyajeet Khare1.0k
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