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340
votes
9
answers
122k
views
183 follow
9
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 8.1 years ago by ole.tange • 4.0k
569
votes
24
answers
63k
views
280 follow
24
answers
News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 4.2 years ago by Istvan Albert ♦♦ 86k • updated 4 hours ago by meriv41409 • 0
272
votes
11
answers
33k
views
196 follow
11
answers
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
forum papers tutorial rna-seq sequencing written 5.1 years ago by CandiceChuDVM • 2.2k
228
votes
0
answers
65k
views
168 follow
0
answers
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
tutorial coordinates written 7.4 years ago by Obi Griffith ♦ 19k • updated 20 days ago by ashotmarg2004 • 10
224
votes
1
answer
66k
views
224 follow
1
answer
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 5.6 years ago by TriS • 4.3k • updated 14 months ago by jnmcluo • 0
247
votes
8
answers
122k
views
211 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 6.5 years ago by Obi Griffith ♦ 19k • updated 14 months ago by Chvatil • 60
254
votes
7
answers
16k
views
181 follow
7
answers
Forum: Bioinformatics courses, workshops or training
tutorial training forum courses workshop written 5.8 years ago by Deepak Tanwar • 4.1k
342
votes
26
answers
44k
views
109 follow
26
answers
Recommend Your Favorite Bioinformatics Books
books education written 11.0 years ago by Istvan Albert ♦♦ 86k • updated 18 months ago by sagor.ced01 • 0
181
votes
11
answers
70k
views
81 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 11.0 years ago by Yuri • 1.6k • updated 3.3 years ago by bernatgel • 2.9k
232
votes
15
answers
65k
views
78 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 10.8 years ago by Biomed ♦ 4.7k • updated 6.1 years ago by Barry • 40
179
votes
2
answers
61k
views
140 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 8.4 years ago by Obi Griffith ♦ 19k • updated 10 months ago by lsbw • 0
195
votes
1
answer
109k
views
128 follow
1
answer
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 8.0 years ago by Malachi Griffith ♦ 18k • updated 9 weeks ago by zlbio12 • 0
143
votes
17
answers
49k
views
120 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 8.3 years ago by vijay • 1.6k • updated 2.6 years ago by MetaTK • 20
1073
votes
73
answers
35k
views
176 follow
73
answers
Forum: What Are The Most Common Stupid Mistakes In Bioinformatics?
software forum written 9.9 years ago by Jeremy Leipzig ♦ 19k • updated 9 months ago by zx8754 ♦ 10.0k
282
votes
25
answers
15k
views
79 follow
25
answers
Bioinformatics "Cheat Sheet"
written 10.0 years ago by Chris Miller ♦ 21k • updated 4.4 years ago by jokipokemon0002 • 0
317
votes
32
answers
47k
views
63 follow
32
answers
What Tools/Libraries Do You Use To Visualize Genomic Feature Data?
genome visualization written 11.0 years ago by brentp ♦ 23k • updated 3.8 years ago by dariober ♦ 11k
84
votes
0
answers
27k
views
95 follow
0
answers
Tutorial: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
bioconductor expression classification microarray tutorial written 7.4 years ago by Obi Griffith ♦ 19k • updated 4.2 years ago by yuanjun.ma • 0
137
votes
5
answers
44k
views
102 follow
5
answers
Tutorial: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
cancer tutorial tcga maf music mutation written 7.9 years ago by Cyriac Kandoth ♦ 5.5k • updated 3.0 years ago by Shicheng Guo • 8.6k
129
votes
1
answer
29k
views
119 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 3.3 years ago by Kevin Blighe ♦ 71k
289
votes
11
answers
169k
views
127 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 10.1 years ago by Biomed ♦ 4.7k • updated 2.6 years ago by WouterDeCoster ♦ 45k
247
votes
15
answers
26k
views
51 follow
15
answers
How Do You Manage Your Files & Directories For Your Projects ?
file written 10.9 years ago by Pierre Lindenbaum ♦ 134k
222
votes
18
answers
261k
views
107 follow
18
answers
Gene Id Conversion Tool
mapping conversion written 11.4 years ago by Renee • 620 • updated 13 months ago by tamerg • 80
98
votes
3
answers
23k
views
75 follow
3
answers
Tutorial: Guide to TCGA data
cancer tutorial tcga rna-seq tools clinical written 5.0 years ago by Jordan Anaya • 1.1k • updated 4.3 years ago by ewre • 240
310
votes
38
answers
17k
views
72 follow
38
answers
Your Favorite Bioinformatics Blogs (March 2010)
subjective written 11.0 years ago by Giovanni M Dall'Olio ♦ 27k • updated 2.7 years ago by CY • 560
110
votes
0
answers
13k
views
109 follow
0
answers
Tutorial: Survival analysis with gene expression
geo survival analysis tutorial gene expression cox written 2.4 years ago by Kevin Blighe ♦ 71k • updated 8 months ago by Hamtaro • 10
119
votes
8
answers
59k
views
80 follow
8
answers
Tutorial: Piping With Samtools, Bwa And Bedtools
bedtools tutorial samtools unix bwa written 8.9 years ago by Ying W • 4.0k • updated 5.3 years ago by Yaseen Ladak • 30
133
votes
10
answers
59k
views
73 follow
10
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 9.2 years ago by Malachi Griffith ♦ 18k
140
votes
13
answers
16k
views
38 follow
13
answers
What Are The Classic Papers In Bioinformatics?
papers literature written 10.4 years ago by Casey Bergman ♦ 18k • updated 10.4 years ago by Israel Barrantes • 790
182
votes
20
answers
26k
views
68 follow
20
answers
How To Organize A Pipeline Of Small Scripts Together?
pipeline general written 11.0 years ago by Giovanni M Dall'Olio ♦ 27k • updated 2.6 years ago by Biostar ♦♦ 20
188
votes
23
answers
29k
views
58 follow
23
answers
Where To Advertise Or Find Bioinformatics Jobs
career job written 11.0 years ago by Istvan Albert ♦♦ 86k • updated 13 months ago by ekwame • 70
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