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Is Kallisto able to deal with UMIs and paired-end RNASeq?
umi kallisto rna-seq written 1 hour ago by antgomo20 • updated 1 hour ago by genomax59k
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Compare samples from bacterial genome
metagenomics deseq written 2 hours ago by David120 • updated 1 hour ago by WouterDeCoster35k
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GDCprepare stop working for some unknown reason
tcgabiolinks gdcprepare rna-seq written 2 hours ago by ansari.sarabio0 • updated 1 hour ago by RamRS19k
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82
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Extract Hard-clipped and soft-clipped values from fifth column
perl sequencing awk bash written 2 hours ago by Ram120 • updated 2 hours ago by Pierre Lindenbaum115k
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WGCNA threshold values
rnaseq wgcna threshold clustering written 4 hours ago by priyankaraina1010 • updated 3 hours ago by Kevin Blighe33k
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39
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47
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Annovar and VEP overlapp
annovar vep written 6 hours ago by BAGeno100 • updated 4 hours ago by Kevin Blighe33k
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Pilon polishing highly repetitive nanopore assembly
genome assembly pilon nanopore canu written 9 hours ago by treitlis30 • updated 9 hours ago by WouterDeCoster35k
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GATK best practices for Broad-produced NGS data
gatk4 ngs broadinstitute variantcalling written 10 hours ago by Mehulsharma.2530 • updated 4 hours ago by vdauwera880
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How to check breakpoint after detecting a CNV.
sequencing written 10 hours ago by Fonso10 • updated 5 hours ago by Fabio Marroni2.0k
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5 follow
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Extracting the full read ID when converting from BAM -> FASTQ
fastq bam samtools bwa written 12 hours ago by ttmigueltt0 • updated 10 hours ago by toralmanvar720
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Failed to populate reference for id 1?
samtools written 13 hours ago by cmdcolin930
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Genotypes from different strand for same variant position
genotype strand written 14 hours ago by first20 • updated 11 hours ago by finswimmer7.8k
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