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374
votes
19
answers
28k
views
171 follow
19
answers
News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 21 months ago by Istvan Albert ♦♦ 77k • updated 3 hours ago by Ram ♦ 17k
239
votes
7
answers
9.9k
views
161 follow
7
answers
Forum: Bioinformatics courses, workshops or training
tutorial training forum courses workshop written 3.4 years ago by Deepak Tanwar • 3.9k
156
votes
1
answer
41k
views
154 follow
1
answer
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.1 years ago by TriS • 3.4k • updated 11 days ago by skjobs0123 • 0
229
votes
11
answers
21k
views
154 follow
11
answers
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
forum papers tutorial rna-seq sequencing written 2.6 years ago by CandiceChuDVM • 1.7k
172
votes
8
answers
70k
views
153 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 4.1 years ago by Obi Griffith ♦ 17k • updated 7 months ago by simplitia • 30
302
votes
10
answers
102k
views
152 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.6 years ago by ole.tange • 3.2k • updated 4 months ago by suny.bio • 0
1028
votes
73
answers
29k
views
152 follow
73
answers
What Are The Most Common Stupid Mistakes In Bioinformatics?
software written 7.5 years ago by Jeremy Leipzig ♦ 17k • updated 12 months ago by mforde84 • 1.2k
163
votes
2
answers
50k
views
121 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 6.0 years ago by Obi Griffith ♦ 17k • updated 10 months ago by Kevin Blighe ♦ 28k
168
votes
1
answer
38k
views
116 follow
1
answer
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
tutorial coordinates written 4.9 years ago by Obi Griffith ♦ 17k
223
votes
11
answers
125k
views
108 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.7 years ago by Biomed ♦ 4.4k • updated 6 weeks ago by WouterDeCoster ♦ 32k
128
votes
17
answers
40k
views
106 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 5.8 years ago by vijay • 1.4k • updated 5 weeks ago by MetaTK • 10
174
votes
5
answers
120k
views
93 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 5.9 years ago by sohadb1357 • 440 • updated 8 weeks ago by Simply Bioinformatics • 110
142
votes
16
answers
15k
views
90 follow
16
answers
Which Bioinformatic Friendly Pipeline Building Framework?
scripting written 4.7 years ago by Carlos Borroto • 1.7k • updated 15 months ago by pwwang • 0
142
votes
3
answers
69k
views
87 follow
3
answers
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 5.6 years ago by Malachi Griffith ♦ 16k
122
votes
7
answers
36k
views
87 follow
7
answers
Tutorial: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
cancer tutorial tcga maf music mutation written 5.4 years ago by Cyriac Kandoth ♦ 5.0k • updated 7 months ago by Shicheng Guo • 6.5k
317
votes
26
answers
34k
views
87 follow
26
answers
Recommend Your Favorite Bioinformatics Books
books education written 8.6 years ago by Istvan Albert ♦♦ 77k • updated 9 months ago by KVC_bioinfo • 320
197
votes
15
answers
223k
views
83 follow
15
answers
Gene Id Conversion Tool
mapping conversion written 8.9 years ago by Renee • 540 • updated 10 months ago by Jerry Zhu • 0
70
votes
2
answers
22k
views
79 follow
2
answers
Tutorial: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
bioconductor expression classification microarray tutorial written 4.9 years ago by Obi Griffith ♦ 17k • updated 21 months ago by yuanjun.ma • 0
131
votes
5
answers
13k
views
76 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 3.8 years ago by Parham • 1.3k • updated 2.0 years ago by hed.robin • 30
225
votes
12
answers
4.7k
views
76 follow
12
answers
Forum: Good Habit for Bioinformatics Analyst or Scientist
analyst forum habit scientist written 2.4 years ago by Shicheng Guo • 6.5k
270
votes
25
answers
12k
views
75 follow
25
answers
Bioinformatics "Cheat Sheet"
written 7.5 years ago by Chris Miller ♦ 20k • updated 23 months ago by jokipokemon0002 • 0
104
votes
10
answers
45k
views
73 follow
10
answers
Tutorial: Piping With Samtools, Bwa And Bedtools
bedtools tutorial samtools unix bwa written 6.4 years ago by Ying W • 3.8k • updated 2.9 years ago by Yaseen Ladak • 20
226
votes
15
answers
61k
views
72 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 8.3 years ago by Biomed ♦ 4.4k • updated 3.6 years ago by Barry • 40
167
votes
11
answers
58k
views
71 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 8.5 years ago by Yuri • 1.5k • updated 10 months ago by bernatgel • 1.2k
307
votes
38
answers
15k
views
69 follow
38
answers
Your Favorite Bioinformatics Blogs (March 2010)
subjective written 8.6 years ago by Giovanni M Dall'Olio ♦ 26k • updated 12 weeks ago by CY • 190
81
votes
1
answer
5.7k
views
68 follow
1
answer
Tutorial: Current Topics in Genome Analysis 2014 (collection of educational lectures)
lectures tutorial training genomics workshop written 4.3 years ago by Malachi Griffith ♦ 16k
125
votes
9
answers
46k
views
66 follow
9
answers
Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
splicing tools rna-seq alternative-splicing written 5.6 years ago by Nicolas Rosewick ♦ 6.6k • updated 5 months ago by kristoffer.vittingseerup • 470
137
votes
4
answers
129k
views
65 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 6.5 years ago by Obi Griffith ♦ 17k • updated 2.0 years ago by jokipokemon0001 • 0
67
votes
0
answers
7.9k
views
65 follow
0
answers
Tutorial: Bioinformatics For Metagenomic Analyses
bioinformatics tutorial taxonomy qc metagenomics written 4.5 years ago by umer.zeeshan.ijaz • 1.7k
165
votes
19
answers
45k
views
65 follow
19
answers
How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 7.9 years ago by Zhangleisdau • 270 • updated 3 hours ago by ferroao • 0
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