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465
votes
19
answers
43k
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225 follow
19
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.9 years ago by Istvan Albert ♦♦ 81k • updated 3 hours ago by zoeywilson141 • 0
192
votes
4
answers
54k
views
194 follow
4
answers
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 4.2 years ago by TriS • 3.9k • updated 4 weeks ago by skjobs0123 • 40
211
votes
8
answers
94k
views
187 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 5.1 years ago by Obi Griffith ♦ 18k • updated 10 months ago by Renesh • 1.6k
249
votes
11
answers
27k
views
172 follow
11
answers
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
forum papers tutorial rna-seq sequencing written 3.7 years ago by CandiceChuDVM • 1.9k
245
votes
7
answers
14k
views
169 follow
7
answers
Forum: Bioinformatics courses, workshops or training
tutorial training forum courses workshop written 4.4 years ago by Deepak Tanwar • 4.0k
316
votes
11
answers
112k
views
161 follow
11
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 6.7 years ago by ole.tange • 3.5k
1032
votes
73
answers
32k
views
156 follow
73
answers
What Are The Most Common Stupid Mistakes In Bioinformatics?
software written 8.6 years ago by Jeremy Leipzig ♦ 18k • updated 2.1 years ago by mforde84 • 1.2k
199
votes
0
answers
50k
views
140 follow
0
answers
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
tutorial coordinates written 6.0 years ago by Obi Griffith ♦ 18k
172
votes
2
answers
56k
views
129 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 7.1 years ago by Obi Griffith ♦ 18k • updated 24 months ago by Kevin Blighe ♦ 50k
248
votes
11
answers
145k
views
118 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 8.7 years ago by Biomed ♦ 4.6k • updated 14 months ago by WouterDeCoster ♦ 41k
136
votes
17
answers
45k
views
113 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 6.9 years ago by vijay • 1.5k • updated 14 months ago by MetaTK • 20
209
votes
5
answers
148k
views
111 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 7.0 years ago by sohadb1357 • 510 • updated 4 months ago by ibseq12 • 0
170
votes
1
answer
84k
views
107 follow
1
answer
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 6.6 years ago by Malachi Griffith ♦ 17k
329
votes
26
answers
38k
views
96 follow
26
answers
Recommend Your Favorite Bioinformatics Books
books education written 9.6 years ago by Istvan Albert ♦♦ 81k • updated 8 weeks ago by sagor.ced01 • 0
209
votes
15
answers
243k
views
95 follow
15
answers
Gene Id Conversion Tool
mapping conversion written 10.0 years ago by Renee • 590 • updated 6 months ago by fatimarasool135 • 40
132
votes
5
answers
40k
views
95 follow
5
answers
Tutorial: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
cancer tutorial tcga maf music mutation written 6.5 years ago by Cyriac Kandoth ♦ 5.3k • updated 20 months ago by Shicheng Guo • 7.8k
145
votes
16
answers
19k
views
94 follow
16
answers
Which Bioinformatic Friendly Pipeline Building Framework?
scripting written 5.7 years ago by Carlos Borroto • 1.8k
78
votes
0
answers
25k
views
89 follow
0
answers
Tutorial: Machine Learning For Cancer Classification - Part 1 - Preparing The Data Sets
bioconductor expression classification microarray tutorial written 6.0 years ago by Obi Griffith ♦ 18k • updated 2.8 years ago by yuanjun.ma • 0
102
votes
1
answer
16k
views
83 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 23 months ago by Kevin Blighe ♦ 50k
137
votes
5
answers
20k
views
82 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 4.9 years ago by Parham • 1.4k • updated 3.1 years ago by hed.robin • 30
228
votes
12
answers
5.7k
views
80 follow
12
answers
Forum: Good Habit for Bioinformatics Analyst or Scientist
analyst forum habit scientist written 3.5 years ago by Shicheng Guo • 7.8k
231
votes
15
answers
63k
views
77 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.4 years ago by Biomed ♦ 4.6k • updated 4.7 years ago by Barry • 40
112
votes
8
answers
52k
views
77 follow
8
answers
Tutorial: Piping With Samtools, Bwa And Bedtools
bedtools tutorial samtools unix bwa written 7.5 years ago by Ying W • 3.9k • updated 3.9 years ago by Yaseen Ladak • 20
174
votes
11
answers
64k
views
77 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 9.6 years ago by Yuri • 1.5k • updated 23 months ago by bernatgel • 2.1k
276
votes
25
answers
13k
views
75 follow
25
answers
Bioinformatics "Cheat Sheet"
written 8.6 years ago by Chris Miller ♦ 21k • updated 3.0 years ago by jokipokemon0002 • 0
72
votes
0
answers
4.0k
views
75 follow
0
answers
Tutorial: Survival analysis with gene expression
geo survival analysis tutorial gene expression cox written 12 months ago by Kevin Blighe ♦ 50k
110
votes
8
answers
25k
views
71 follow
8
answers
Forum: Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
homer deeptools forum chip-seq ngsplot visualization written 3.6 years ago by Sinji • 2.9k • updated 9 weeks ago by ATpoint ♦ 24k
66
votes
0
answers
54k
views
70 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 5.9 years ago by Nicholas Spies • 1.1k • updated 13 months ago by RamRS ♦ 24k
128
votes
10
answers
53k
views
70 follow
10
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 7.8 years ago by Malachi Griffith ♦ 17k • updated 7 weeks ago by Shicheng Guo • 7.8k
171
votes
20
answers
50k
views
70 follow
20
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How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 9.0 years ago by Zhangleisdau • 270 • updated 11 months ago by michau • 20
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