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scRNA-seq and the batch effects
scrna-seq rna-seq written 23 hours ago by Bogdan • 890 • updated 6 minutes ago by jared.andrews07 • 4.1k
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Prokka Python Script for Gene Annotation
python annotation script prokka linux written 5 hours ago by Fido • 10 • updated 55 minutes ago by Mensur Dlakic • 2.4k
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16
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Transdecoder producing more proteins than assembly
rna-seq written 1 hour ago by 1234anjalianjali1234 • 30
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1
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139
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Tracing back files used in CLC Genomics?
clc fisher blast2go blast rna-seq written 7 weeks ago by jjrin • 10 • updated 2 hours ago by Biostar ♦♦ 20
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55
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Species variation after longer sequencing time
assembly next-gen sequencing written 4 hours ago by firminlago • 0
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16
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meaning of "Total subpeaks" in Homer's mergePeaks?
homer chip-seq atac-seq written 3 hours ago by fr • 120
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228 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 3.0 years ago by Istvan Albert ♦♦ 81k
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24
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chromHMM segmented genome annotation for genes
chip-seq written 3 hours ago by elb • 170
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40
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Help with genome guided de novo assembly in trinity
assembly zebrafish trinity rna-seq genome guided written 3 hours ago by vrea • 0
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38
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RNA-Seq tissue references?
rna-seq written 4 hours ago by crvaglio • 0
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question about the equation of counts in STAR ReadsPerGene.out.tab
readspergene.out.tab star written 4 days ago by boymin2020 • 20 • updated 4 hours ago by h.mon ♦ 28k
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[E::faidx_fetch_seq] error with Samtools mpileup?
snp written 4 hours ago by mwerseb1 • 0 • updated 4 hours ago by RamRS ♦ 25k
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1
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61
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cerebral installation problem
cytoscape written 5 days ago by samane. • 0 • updated 4 hours ago by scooter • 110
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35
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Append only sequence itself to list, no metadata
fasta python biopython written 4 hours ago by sam.vanbergen8 • 0
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(Closed) How can I calculate the p-value of two balls coming together?
p-value statistics written 4 hours ago by zyongbing • 0
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Differentially expressed genes analysis Limma microarray
R limma microarrays written 7 hours ago by judhenaosa • 0 • updated 5 hours ago by h.mon ♦ 28k
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32
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how to do gene mutation multivariate survival analysis?
maf coxph mutation written 5 hours ago by jnmcluo • 0
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42
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The best tool for time course differential expression with R
R rna-seq written 5 hours ago by sabaghianamir70 • 10 • updated 5 hours ago by zx8754 ♦ 8.8k
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40
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Minfi preprocessNoob vs preprocessQuantile normalization for Illumina EPIC array
R bioconductor minfi written 5 hours ago by jeni • 0 • updated 5 hours ago by zx8754 ♦ 8.8k
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58
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1
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Unique lines among 200 files
ngs bash written 6 hours ago by User000 • 270 • updated 5 hours ago by Pierre Lindenbaum ♦ 124k
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25
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Why is asn2fasta so slow compared to efetch (when the sequence is not part of asn.1)?
ncbi entez asn2fasta written 5 hours ago by massa.kassa.sc3na • 160
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News: Training in Variant Analysis @NIH, January 28-31, 2020
genome #analysis news next-gen #variantcalling written 5 hours ago by AABI • 120
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36
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Mapping to duplicated region
mismapping heteroplasmy mitogenome snp duplication written 9 hours ago by eadele • 0
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ABsolute Immune Signal (ABIS) deconvolution output
deconvolution rna-seq written 6 hours ago by harikrishnanc903 • 0
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1
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622
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How to highlight regions in RNA second structure
rna second structure written 22 months ago by biolab • 1.1k • updated 6 hours ago by shzhang • 0
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Could not locate bowtie index (miRDeep2 analysis)
mirna mirdeep2 bowtie index rna-seq written 3 days ago by misslaurenheadley • 10
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Sanger sequencing data analysis
sequence tool written 3.2 years ago by adrian.jose09 • 0 • updated 7 hours ago by trausch • 1.4k
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Are there advantages in using high accuracy models for guppy basecaller when Illumina data are available?
genome assembly sequencing written 18 hours ago by ikangkim • 30 • updated 7 hours ago by colindaven • 1.9k
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Job: Postdoctoral Research Fellow position within molecular cell biology/biochemistry, University of Bergen, Norway
biochemistry job genomics vault written 8 hours ago by Michael Dondrup ♦ 47k
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best blast strategy: read vs cluster?
strategy alignment search blast written 11 hours ago by marongiu.luigi • 420
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