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222
votes
18
answers
261k
views
107 follow
18
answers
Gene Id Conversion Tool
mapping conversion written 11.4 years ago by Renee620 • updated 13 months ago by tamerg80
48
votes
2
answers
200k
views
34 follow
2
answers
223
votes
5
answers
184k
views
115 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 8.3 years ago by sohadb1357510 • updated 15 months ago by mahdi_sh13870
289
votes
11
answers
169k
views
127 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 10.1 years ago by Biomed4.7k • updated 2.6 years ago by WouterDeCoster45k
145
votes
4
answers
158k
views
70 follow
4
answers
42
votes
3
answers
154k
views
33 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 7.2 years ago by Arpitha Hebbar200 • updated 10 months ago by brianpenghe50
114
votes
6
answers
149k
views
50 follow
6
answers
What'S The Difference Between Cds And Orf?
cds orf written 8.7 years ago by shiy05330 • updated 11 months ago by ciro.santilli20
134
votes
7
answers
144k
views
32 follow
7
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 10.9 years ago by Pierre Lindenbaum134k • updated 15 months ago by Renesh2.0k
50
votes
1
answer
136k
views
11 follow
1
answer
How To Deal With Duplicate Row Names Error In R
R written 8.1 years ago by Diana850 • updated 8.1 years ago by Michael Dondrup48k
144
votes
3
answers
135k
views
67 follow
3
answers
Forward And Reverse Strand Conventions
sequence strand written 10.3 years ago by Andrea_Bio2.6k • updated 10.1 years ago by Neilfws49k
110
votes
5
answers
128k
views
23 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 10.7 years ago by Biomed4.7k • updated 7.3 years ago by Chris Miller21k
340
votes
9
answers
122k
views
183 follow
9
answers
247
votes
8
answers
122k
views
211 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 6.5 years ago by Obi Griffith19k • updated 14 months ago by Chvatil60
105
votes
2
answers
119k
views
49 follow
2
answers
Blast - Formatting Output
format blast output written 7.2 years ago by timjoncooper240 • updated 5 months ago by apekshasharma77770
108
votes
7
answers
115k
views
28 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 10.9 years ago by Eric Normandeau11k • updated 2.5 years ago by Ram32k
10
votes
2
answers
114k
views
7 follow
2
answers
How To Count The Number Of Elements In A Column Other Than 'X' In R
R programming written 9.7 years ago by Don20 • updated 9.7 years ago by Stefano Berri4.2k
195
votes
1
answer
109k
views
128 follow
1
answer
22
votes
3
answers
108k
views
9 follow
3
answers
How to calculate "fold changes" in gene expression?
gene R written 5.8 years ago by juan.rosas170 • updated 4.6 years ago by Vasei30
26
votes
4
answers
107k
views
16 follow
4
answers
Calculating P-Values From Z-Scores
R statistics written 9.1 years ago by Diana850 • updated 2.4 years ago by Kevin Blighe71k
125
votes
21
answers
107k
views
73 follow
21
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 10.0 years ago by Gon520 • updated 23 months ago by malina0
110
votes
6
answers
107k
views
36 follow
6
answers
Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
fasta sequence human bwa written 10.6 years ago by Biomed4.7k • updated 4.1 years ago by Hajk-Georg Drost150
115
votes
7
answers
105k
views
16 follow
7
answers
When To Choose Python Over Perl (And Vice Versa)?
perl python comparison written 9.3 years ago by Niek De Klein2.5k • updated 9.0 years ago by Aditya Joshi30
28
votes
2
answers
102k
views
20 follow
2
answers
88
votes
5
answers
101k
views
41 follow
5
answers
Best Way To Do Pathway Analysis Of A Set Of Genes?
pathway function genes protein analysis written 8.9 years ago by Wayne1.0k • updated 8.9 years ago by Guangchuang Yu2.4k
124
votes
9
answers
98k
views
67 follow
9
answers
Useful Bash Commands To Handle Fasta Files
fasta list command-line bash written 9.0 years ago by Anima Mundi2.8k • updated 3.4 years ago by Joe19k
46
votes
3
answers
97k
views
30 follow
3
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 7.9 years ago by biorepine1.5k • updated 15 months ago by Renesh2.0k
3
votes
1
answer
95k
views
1
answer
Find mismatch in two columns in a data frame in R
R written 5.0 years ago by dirranrak20 • updated 5.0 years ago by dan.shea10
144
votes
10
answers
95k
views
49 follow
10
answers
Fastq Convert To Fasta
perl written 7.3 years ago by biolab1.2k • updated 16 months ago by brianpenghe50
117
votes
4
answers
94k
views
31 follow
4
answers
Generate vcf.gz file and its index file vcf.gz.tbi
vcf tabix written 8.2 years ago by lyz10302012360 • updated 2.5 years ago by zx875410.0k
115
votes
11
answers
94k
views
23 follow
11
answers
Economics Of A Career In Bioinformatics
career written 10.3 years ago by Terence190 • updated 10.1 years ago by Mona Mohamed0
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