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219
votes
18
answers
252k
views
105 follow
18
answers
Gene Id Conversion Tool
mapping conversion written 10.6 years ago by Renee620 • updated 3 months ago by tamerg70
41
votes
2
answers
179k
views
32 follow
2
answers
217
votes
5
answers
164k
views
115 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 7.6 years ago by sohadb1357510 • updated 6 months ago by mahdi_sh13870
270
votes
11
answers
156k
views
126 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 9.3 years ago by Biomed4.6k • updated 21 months ago by WouterDeCoster43k
145
votes
4
answers
150k
views
70 follow
4
answers
105
votes
6
answers
141k
views
44 follow
6
answers
What'S The Difference Between Cds And Orf?
cds orf written 8.0 years ago by shiy05320 • updated 6 weeks ago by ciro.santilli0
42
votes
3
answers
137k
views
33 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 6.5 years ago by Arpitha Hebbar200 • updated 18 days ago by brianpenghe20
130
votes
7
answers
136k
views
32 follow
7
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 10.1 years ago by Pierre Lindenbaum128k • updated 6 months ago by Renesh1.8k
126
votes
3
answers
126k
views
54 follow
3
answers
Forward And Reverse Strand Conventions
sequence strand written 9.6 years ago by Andrea_Bio2.6k • updated 9.4 years ago by Neilfws48k
110
votes
5
answers
119k
views
23 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 9.9 years ago by Biomed4.6k • updated 6.5 years ago by Chris Miller21k
41
votes
1
answer
118k
views
9 follow
1
answer
How To Deal With Duplicate Row Names Error In R
R written 7.3 years ago by Diana800 • updated 7.3 years ago by Michael Dondrup47k
332
votes
8
answers
117k
views
178 follow
8
answers
229
votes
8
answers
108k
views
201 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 5.7 years ago by Obi Griffith18k • updated 5 months ago by Darill40
91
votes
2
answers
108k
views
44 follow
2
answers
Blast - Formatting Output
format blast output written 6.5 years ago by timjoncooper200 • updated 2.4 years ago by sridhar.rg10
10
votes
2
answers
105k
views
7 follow
2
answers
How To Count The Number Of Elements In A Column Other Than 'X' In R
R programming written 8.9 years ago by Don20 • updated 8.9 years ago by Stefano Berri4.1k
110
votes
6
answers
104k
views
36 follow
6
answers
Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
fasta sequence human bwa written 9.9 years ago by Biomed4.6k • updated 3.3 years ago by Hajk-Georg Drost140
115
votes
7
answers
103k
views
16 follow
7
answers
When To Choose Python Over Perl (And Vice Versa)?
perl python comparison written 8.6 years ago by Niek De Klein2.5k • updated 8.2 years ago by Aditya Joshi30
121
votes
21
answers
102k
views
69 follow
21
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 9.2 years ago by Gon490 • updated 13 months ago by malina0
21
votes
3
answers
101k
views
9 follow
3
answers
How to calculate "fold changes" in gene expression?
gene R written 5.1 years ago by juan.rosas170 • updated 3.8 years ago by Vasei30
108
votes
7
answers
101k
views
28 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 10.1 years ago by Eric Normandeau10k • updated 20 months ago by RamRS27k
28
votes
2
answers
100k
views
20 follow
2
answers
87
votes
5
answers
99k
views
40 follow
5
answers
Best Way To Do Pathway Analysis Of A Set Of Genes?
pathway function genes protein analysis written 8.1 years ago by Wayne1.0k • updated 8.1 years ago by Guangchuang Yu2.3k
22
votes
4
answers
99k
views
13 follow
4
answers
Calculating P-Values From Z-Scores
R statistics written 8.3 years ago by Diana800 • updated 20 months ago by Kevin Blighe59k
31
votes
6
answers
94k
views
12 follow
6
answers
How Do You Start Writing An Algorithm? Help Needed!
java structure algorithm written 10.0 years ago by Hazel70 • updated 9.4 years ago by Hazel0
183
votes
1
answer
92k
views
117 follow
1
answer
115
votes
11
answers
92k
views
23 follow
11
answers
Economics Of A Career In Bioinformatics
career written 9.5 years ago by Terence190 • updated 9.4 years ago by Mona Mohamed0
46
votes
3
answers
91k
views
30 follow
3
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 7.1 years ago by biorepine1.5k • updated 6 months ago by Renesh1.8k
116
votes
9
answers
89k
views
60 follow
9
answers
Useful Bash Commands To Handle Fasta Files
fasta list command-line bash written 8.3 years ago by Anima Mundi2.6k • updated 2.6 years ago by Joe16k
139
votes
10
answers
89k
views
47 follow
10
answers
Fastq Convert To Fasta
perl written 6.5 years ago by biolab1.2k • updated 6 months ago by brianpenghe20
11
votes
4
answers
83k
views
10 follow
4
answers
Convert A Text File Into A Fasta File
fasta written 8.5 years ago by Zhshqzyc490 • updated 4.3 years ago by BioApps740
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