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206
votes
11
answers
108k
views
98 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 6.7 years ago by Biomed4.3k • updated 3 days ago by bioinfo890
117
votes
2
answers
55k
views
67 follow
2
answers
129
votes
34
answers
26k
views
131 follow
34
answers
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 2.2 years ago by TriS3.1k • updated 19 hours ago by lenazhou0
289
votes
16
answers
15k
views
125 follow
16
answers
News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 10 months ago by Istvan Albert ♦♦ 74k • updated 17 hours ago by nora40
6
votes
5
answers
15k
views
6 follow
5
answers
Estimating Insert Size From Paired End Data.
picard paired-end alignment written 3.6 years ago by geek_y8.0k • updated 1 day ago by jmodlis0
31
votes
3
answers
14k
views
8 follow
3
answers
Exon Coordinates Of Hg19 Genome Download
exon coordinates human hg written 6.6 years ago by Neeraj150 • updated 6 days ago by Biostar ♦♦ 20
32
votes
8
answers
8.6k
views
14 follow
8
answers
How To Generate A Bibtex File From Pmids
written 6.0 years ago by Farhat2.8k • updated 2 days ago by by090
27
votes
6
answers
8.0k
views
12 follow
6
answers
Remove mitochondrial reads from BAM files
bam samtools rna-seq awk written 2.7 years ago by enricoferrero720 • updated 4 days ago by Amir Shams30
33
votes
1
answer
7.8k
views
40 follow
1
answer
6
votes
2
answers
5.9k
views
2
answers
Trying To Run Psipred But Failing To Use Blastpgp
blast+ written 4.5 years ago by arronslacey220 • updated 5 days ago by paul.zierep0
7
votes
3
answers
5.7k
views
3
answers
Bl2Seq In Blast+
blast written 5.7 years ago by Juliofdiaz130 • updated 4 days ago by Biostar ♦♦ 20
4
votes
2
answers
3.4k
views
2
answers
Allele frequencies for ALL of the variants in 1000Genomes: direct download?
snp sequencing written 3.4 years ago by lillo.sim40 • updated 4 days ago by Biostar ♦♦ 20
30
votes
6
answers
3.3k
views
7 follow
6
answers
9
votes
4
answers
3.3k
views
6 follow
4
answers
Extraction of first sequences from a big fasta file
sequence written 2.7 years ago by vahapel150 • updated 3 days ago by Amir Shams30
1
vote
2
answers
2.9k
views
2
answers
Height Of The Hcluster Dendrogram In R
R written 5.2 years ago by Shuixia100100 • updated 6 days ago by Kevin Blighe3.3k
3
votes
2
answers
2.8k
views
2
answers
4
votes
2
answers
2.7k
views
2
answers
RNA-seq GC content Bimodal distribution
rna-seq written 3.4 years ago by ruansun198330 • updated 1 day ago by from the mountains40
5
votes
2
answers
2.3k
views
2
answers
miRNAseq isoform-to-mature miRNA quantification
rna-seq written 3.4 years ago by TJ40 • updated 2 days ago by gaoteng0
21
votes
0
answers
2.3k
views
6 follow
0
answers
News: NovaSeq from Illumina (updated info)
novaseq illumina news written 9 months ago by genomax34k
2
votes
2
answers
2.3k
views
2
answers
3
votes
1
answer
2.2k
views
1
answer
Error running smartpca from eigensoft
software error snp written 21 months ago by scho24920 • updated 1 day ago by silvia.shuchang.liu0
4
votes
3
answers
2.0k
views
3
answers
Preventing EMBOSS transeq from renaming sequences
translation emboss transeq written 3.1 years ago by Eric Normandeau9.6k • updated 3 days ago by peteladrien0
54
votes
9
answers
2.0k
views
28 follow
9
answers
Forum: Stranger Things: unexpected limitations of popular tools
forum samtools errors hisat2 written 3 months ago by Istvan Albert ♦♦ 74k • updated 6 days ago by Charles Plessy2.2k
9
votes
2
answers
1.9k
views
8 follow
2
answers
Selecting One Ensembl Transcript Id For Each Ensembl Gene Id
ensembl conversion written 5.1 years ago by jackuser1979830 • updated 2 days ago by Astrid_Ensembl30
7
votes
3
answers
1.8k
views
3
answers
Does Illumina Undetermined Fastq files contain barcodes
illumina barcodes demultiplexing written 23 months ago by Paul860 • updated 6 days ago by ptinto140
2
votes
0
answers
1.8k
views
5 follow
0
answers
Cuffmerge : Why It Didn'T Merge These Transcripts Into One ?
cuffmerge transcript written 4.4 years ago by Nicolas Rosewick5.5k • updated 4 days ago by Biostar ♦♦ 20
1
vote
2
answers
1.7k
views
2
answers
Mutation Taster Gdna Coordinates
coordinates mutation written 5.1 years ago by jp.of.mars0 • updated 1 day ago by Biostar ♦♦ 20
8
votes
2
answers
1.7k
views
2
answers
Preparing A Scaffolded Genome For Genbank Submission
gff3 fasta genbank scaffolding written 4.2 years ago by Rvosa560 • updated 5 days ago by eennadi0
9
votes
3
answers
1.5k
views
7 follow
3
answers
A Rank-Weighted Similarity Score
similarity written 4.7 years ago by a3cel250 • updated 1 day ago by Biostar ♦♦ 20
0
votes
3
answers
1.4k
views
3
answers
Cummerbund Returns 0 Sample
cummerbund cuffdiff written 3.7 years ago by madkitty500 • updated 3 days ago by vincr0
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