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198
votes
15
answers
225k
views
83 follow
15
answers
Gene Id Conversion Tool
mapping conversion written 9.0 years ago by Renee550 • updated 11 months ago by Jerry Zhu0
223
votes
11
answers
127k
views
108 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.7 years ago by Biomed4.4k • updated 10 weeks ago by WouterDeCoster32k
179
votes
5
answers
122k
views
93 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 6.0 years ago by sohadb1357450 • updated 12 weeks ago by Simply Bioinformatics110
303
votes
10
answers
103k
views
152 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.7 years ago by ole.tange3.2k • updated 4 months ago by suny.bio0
109
votes
20
answers
87k
views
55 follow
20
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 7.6 years ago by Gon410 • updated 7 months ago by Francis Crick50
35
votes
3
answers
84k
views
25 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 4.9 years ago by Arpitha Hebbar170 • updated 5 months ago by dexetra.in0
78
votes
2
answers
79k
views
31 follow
2
answers
Blast - Formatting Output
format blast output written 4.8 years ago by timjoncooper170 • updated 10 months ago by sridhar.rg0
19
votes
4
answers
76k
views
9 follow
4
answers
Calculating P-Values From Z-Scores
R statistics written 6.7 years ago by Diana750 • updated 18 days ago by Kevin Blighe30k
96
votes
7
answers
71k
views
26 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 8.5 years ago by Eric Normandeau9.9k • updated 5 weeks ago by RamRS18k
174
votes
8
answers
71k
views
156 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 4.1 years ago by Obi Griffith17k • updated 8 months ago by simplitia30
143
votes
3
answers
70k
views
87 follow
3
answers
232
votes
25
answers
65k
views
58 follow
25
answers
170
votes
11
answers
58k
views
73 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 8.6 years ago by Yuri1.5k • updated 11 months ago by bernatgel1.3k
32
votes
7
answers
55k
views
24 follow
7
answers
How To Draw A Heat Map For Gene Expression Data?
microarray heatmap written 7.4 years ago by Fahmida80 • updated 4 months ago by sonpham550
163
votes
2
answers
50k
views
121 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 6.1 years ago by Obi Griffith17k • updated 11 months ago by Kevin Blighe30k
61
votes
0
answers
47k
views
64 follow
0
answers
126
votes
9
answers
47k
views
66 follow
9
answers
109
votes
9
answers
46k
views
59 follow
9
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 6.8 years ago by Malachi Griffith16k • updated 3 months ago by jake.lever10
167
votes
20
answers
45k
views
68 follow
20
answers
How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 8.0 years ago by Zhangleisdau270 • updated 13 days ago by SilentGene10
46
votes
3
answers
45k
views
32 follow
3
answers
Extract Reads From A Bam File That Fall Within A Given Region
bam written 6.3 years ago by abi240 • updated 4 months ago by Alex Reynolds26k
70
votes
11
answers
44k
views
37 follow
11
answers
How To Extract A Sequence From A Big (6Gb) Multifasta File ?
fasta written 6.2 years ago by Mchimich250 • updated 6 months ago by Ezra Kitson10
88
votes
4
answers
44k
views
20 follow
4
answers
What Are Phased And Unphased Genotypes?
genome genotyping written 7.5 years ago by Nick260 • updated 11 months ago by Jerry Zhu0
80
votes
4
answers
44k
views
25 follow
4
answers
Generate vcf.gz file and its index file vcf.gz.tbi
vcf tabix written 5.8 years ago by lyz10302012310 • updated 4 weeks ago by zx87545.3k
52
votes
1
answer
42k
views
38 follow
1
answer
Number of mapped reads from BAM file
reads bam sam mapping written 3.5 years ago by Prakki Rama2.2k • updated 10 weeks ago by iraia.munoa10
156
votes
1
answer
42k
views
154 follow
1
answer
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.2 years ago by TriS3.5k • updated 5 weeks ago by skjobs01230
88
votes
14
answers
42k
views
32 follow
14
answers
Tool to generate proportional Venn Diagrams?
visualization written 7.5 years ago by Ryan D3.3k • updated 23 days ago by zx87545.3k
46
votes
4
answers
42k
views
20 follow
4
answers
Convertion Of Gff3 To Gtf
gtf gff written 6.4 years ago by geek_y8.7k • updated 5 months ago by Asbesto0
51
votes
6
answers
41k
views
19 follow
6
answers
57
votes
6
answers
41k
views
23 follow
6
answers
How To Split A Bam File By Chromosome
bam split chromosome written 6.4 years ago by GPR310 • updated 9 months ago by hewm200810
128
votes
17
answers
41k
views
106 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 5.9 years ago by vijay1.4k • updated 9 weeks ago by MetaTK10
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