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<prev • 14,481 results • page 1 of 483 • next >
198
votes
15
answers
225k
views
83 follow
15
answers
Gene Id Conversion Tool
mapping conversion written 9.0 years ago by Renee • 550 • updated 11 months ago by Jerry Zhu • 0
223
votes
11
answers
127k
views
108 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.7 years ago by Biomed ♦ 4.4k • updated 10 weeks ago by WouterDeCoster ♦ 32k
179
votes
5
answers
122k
views
93 follow
5
answers
How To Filter Mapped Reads With Samtools
samtools written 6.0 years ago by sohadb1357 • 450 • updated 12 weeks ago by Simply Bioinformatics • 110
303
votes
10
answers
103k
views
152 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.7 years ago by ole.tange • 3.2k • updated 4 months ago by suny.bio • 0
109
votes
20
answers
87k
views
55 follow
20
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 7.6 years ago by Gon • 410 • updated 7 months ago by Francis Crick • 50
35
votes
3
answers
84k
views
25 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 4.9 years ago by Arpitha Hebbar • 170 • updated 5 months ago by dexetra.in • 0
78
votes
2
answers
79k
views
31 follow
2
answers
Blast - Formatting Output
format blast output written 4.8 years ago by timjoncooper • 170 • updated 10 months ago by sridhar.rg • 0
19
votes
4
answers
76k
views
9 follow
4
answers
Calculating P-Values From Z-Scores
R statistics written 6.7 years ago by Diana • 750 • updated 18 days ago by Kevin Blighe ♦ 30k
96
votes
7
answers
71k
views
26 follow
7
answers
Correct Way To Parse A Fasta File In Python
fasta python parsing written 8.5 years ago by Eric Normandeau ♦ 9.9k • updated 5 weeks ago by RamRS ♦ 18k
174
votes
8
answers
71k
views
156 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 4.1 years ago by Obi Griffith ♦ 17k • updated 8 months ago by simplitia • 30
143
votes
3
answers
70k
views
87 follow
3
answers
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 5.6 years ago by Malachi Griffith ♦ 16k
232
votes
25
answers
65k
views
58 follow
25
answers
Which Are The Best Programming Languages For A Bioinformatician?
subjective programming written 8.7 years ago by Giovanni M Dall'Olio ♦ 26k • updated 6 months ago by robert.branex • 0
170
votes
11
answers
58k
views
73 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 8.6 years ago by Yuri • 1.5k • updated 11 months ago by bernatgel • 1.3k
32
votes
7
answers
55k
views
24 follow
7
answers
How To Draw A Heat Map For Gene Expression Data?
microarray heatmap written 7.4 years ago by Fahmida • 80 • updated 4 months ago by sonpham • 550
163
votes
2
answers
50k
views
121 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 6.1 years ago by Obi Griffith ♦ 17k • updated 11 months ago by Kevin Blighe ♦ 30k
61
votes
0
answers
47k
views
64 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 4.9 years ago by Nicholas Spies • 990 • updated 6 weeks ago by RamRS ♦ 18k
126
votes
9
answers
47k
views
66 follow
9
answers
Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
splicing tools rna-seq alternative-splicing written 5.6 years ago by Nicolas Rosewick ♦ 6.8k • updated 6 months ago by kristoffer.vittingseerup • 570
109
votes
9
answers
46k
views
59 follow
9
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 6.8 years ago by Malachi Griffith ♦ 16k • updated 3 months ago by jake.lever • 10
167
votes
20
answers
45k
views
68 follow
20
answers
How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 8.0 years ago by Zhangleisdau • 270 • updated 13 days ago by SilentGene • 10
46
votes
3
answers
45k
views
32 follow
3
answers
Extract Reads From A Bam File That Fall Within A Given Region
bam written 6.3 years ago by abi • 240 • updated 4 months ago by Alex Reynolds ♦ 26k
70
votes
11
answers
44k
views
37 follow
11
answers
How To Extract A Sequence From A Big (6Gb) Multifasta File ?
fasta written 6.2 years ago by Mchimich • 250 • updated 6 months ago by Ezra Kitson • 10
88
votes
4
answers
44k
views
20 follow
4
answers
What Are Phased And Unphased Genotypes?
genome genotyping written 7.5 years ago by Nick • 260 • updated 11 months ago by Jerry Zhu • 0
80
votes
4
answers
44k
views
25 follow
4
answers
Generate vcf.gz file and its index file vcf.gz.tbi
vcf tabix written 5.8 years ago by lyz10302012 • 310 • updated 4 weeks ago by zx8754 ♦ 5.3k
52
votes
1
answer
42k
views
38 follow
1
answer
Number of mapped reads from BAM file
reads bam sam mapping written 3.5 years ago by Prakki Rama • 2.2k • updated 10 weeks ago by iraia.munoa • 10
156
votes
1
answer
42k
views
154 follow
1
answer
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.2 years ago by TriS • 3.5k • updated 5 weeks ago by skjobs0123 • 0
88
votes
14
answers
42k
views
32 follow
14
answers
Tool to generate proportional Venn Diagrams?
visualization written 7.5 years ago by Ryan D • 3.3k • updated 23 days ago by zx8754 ♦ 5.3k
46
votes
4
answers
42k
views
20 follow
4
answers
Convertion Of Gff3 To Gtf
gtf gff written 6.4 years ago by geek_y ♦ 8.7k • updated 5 months ago by Asbesto • 0
51
votes
6
answers
41k
views
19 follow
6
answers
How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 7.0 years ago by Hamilton • 260 • updated 4 months ago by har-wradim • 20
57
votes
6
answers
41k
views
23 follow
6
answers
How To Split A Bam File By Chromosome
bam split chromosome written 6.4 years ago by GPR • 310 • updated 9 months ago by hewm2008 • 10
128
votes
17
answers
41k
views
106 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 5.9 years ago by vijay • 1.4k • updated 9 weeks ago by MetaTK • 10
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