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<prev • 14,247 results • page 1 of 475 • next >
197
votes
15
answers
220k
views
83 follow
15
answers
Gene Id Conversion Tool
mapping conversion written 8.8 years ago by Renee • 540 • updated 8 months ago by Jerry Zhu • 0
218
votes
11
answers
122k
views
106 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.5 years ago by Biomed ♦ 4.4k • updated 9 months ago by bioinfo8 • 90
300
votes
10
answers
100k
views
152 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.4 years ago by ole.tange • 3.1k • updated 8 weeks ago by suny.bio • 0
107
votes
20
answers
85k
views
52 follow
20
answers
Is There A Free Alternative To Ingenuity Pathway Analysis?
pathway network written 7.4 years ago by Gon • 400 • updated 4 months ago by Francis Crick • 50
35
votes
3
answers
80k
views
24 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 4.6 years ago by Arpitha Hebbar • 170 • updated 10 weeks ago by dexetra.in • 0
73
votes
2
answers
75k
views
27 follow
2
answers
Blast - Formatting Output
format blast output written 4.6 years ago by timjoncooper • 140 • updated 7 months ago by sridhar.rg • 0
140
votes
3
answers
67k
views
85 follow
3
answers
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 5.4 years ago by Malachi Griffith ♦ 16k
37
votes
3
answers
67k
views
24 follow
3
answers
Which Expression Units To Use, Fpkm Or Rpkm ?
rpkm fpkm rna-seq written 5.3 years ago by biorepine • 1.4k • updated 10 months ago by Renesh • 1.3k
171
votes
8
answers
67k
views
153 follow
8
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 3.9 years ago by Obi Griffith ♦ 16k • updated 5 months ago by simplitia • 20
232
votes
25
answers
64k
views
58 follow
25
answers
Which Are The Best Programming Languages For A Bioinformatician?
subjective programming written 8.5 years ago by Giovanni M Dall'Olio ♦ 26k • updated 3 months ago by robert.branex • 0
101
votes
9
answers
60k
views
46 follow
9
answers
Useful Bash Commands To Handle Fasta Files
fasta list command-line bash written 6.4 years ago by Anima Mundi • 2.3k • updated 9 months ago by jrj.healey • 5.0k
167
votes
11
answers
56k
views
71 follow
11
answers
Drawing Chromosome Ideograms With Data
visualization ideogram chromosome written 8.3 years ago by Yuri • 1.5k • updated 8 months ago by bernatgel • 1.2k
32
votes
7
answers
53k
views
24 follow
7
answers
How To Draw A Heat Map For Gene Expression Data?
microarray heatmap written 7.1 years ago by Fahmida • 80 • updated 8 weeks ago by sonpham • 350
160
votes
2
answers
49k
views
119 follow
2
answers
Tutorial: Analysing Microarray Data In Bioconductor
tutorial analysis bioconductor microarray written 5.8 years ago by Obi Griffith ♦ 16k • updated 8 months ago by Kevin Blighe ♦ 24k
123
votes
9
answers
45k
views
66 follow
9
answers
Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
splicing tools rna-seq alternative-splicing written 5.4 years ago by Nicolas Rosewick ♦ 6.5k • updated 3 months ago by kristoffer.vittingseerup • 470
58
votes
1
answer
45k
views
59 follow
1
answer
Tutorial: Machine Learning For Cancer Classification - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 4.7 years ago by Nicholas Spies • 960 • updated 20 days ago by Obi Griffith ♦ 16k
109
votes
9
answers
44k
views
59 follow
9
answers
Database Of Tumor Suppressors And/Or Oncogenes
gene database tumor oncogene cancer written 6.6 years ago by Malachi Griffith ♦ 16k • updated 4 days ago by jake.lever • 10
87
votes
4
answers
42k
views
20 follow
4
answers
What Are Phased And Unphased Genotypes?
genome genotyping written 7.2 years ago by Nick • 260 • updated 8 months ago by Jerry Zhu • 0
68
votes
11
answers
42k
views
36 follow
11
answers
How To Extract A Sequence From A Big (6Gb) Multifasta File ?
fasta written 6.0 years ago by Mchimich • 250 • updated 3 months ago by Ezra Kitson • 10
41
votes
3
answers
41k
views
29 follow
3
answers
Extract Reads From A Bam File That Fall Within A Given Region
bam written 6.0 years ago by abi • 220 • updated 8 weeks ago by Alex Reynolds ♦ 24k
74
votes
4
answers
40k
views
22 follow
4
answers
Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
vcf written 5.6 years ago by lyz10302012 • 270 • updated 4 months ago by miaowzai • 60
121
votes
16
answers
39k
views
97 follow
16
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 5.6 years ago by vijay • 1.4k • updated 20 days ago by apaytuvi • 10
49
votes
6
answers
39k
views
19 follow
6
answers
How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 6.8 years ago by Hamilton • 260 • updated 5 weeks ago by har-wradim • 20
43
votes
4
answers
39k
views
20 follow
4
answers
Convertion Of Gff3 To Gtf
gtf gff written 6.2 years ago by geek_y ♦ 8.6k • updated 9 weeks ago by Asbesto • 0
54
votes
6
answers
38k
views
22 follow
6
answers
How To Split A Bam File By Chromosome
bam split chromosome written 6.1 years ago by GPR • 310 • updated 6 months ago by hewm2008 • 10
152
votes
37
answers
37k
views
151 follow
37
answers
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.0 years ago by TriS • 3.4k • updated 8 weeks ago by skjobs0123 • 0
166
votes
1
answer
36k
views
116 follow
1
answer
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
tutorial coordinates written 4.7 years ago by Obi Griffith ♦ 16k
120
votes
7
answers
35k
views
86 follow
7
answers
Tutorial: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
cancer tutorial tcga maf music mutation written 5.3 years ago by Cyriac Kandoth ♦ 5.0k • updated 5 months ago by Shicheng Guo • 5.2k
27
votes
5
answers
35k
views
26 follow
5
answers
Public Electronic Health Records Database
database written 5.2 years ago by Abhi • 1.5k • updated 7 months ago by wilthelight • 0
68
votes
6
answers
35k
views
42 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 4.1 years ago by krithika.gu • 200 • updated 10 days ago by Fred0730 • 10
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