I apologize if the question is too basic.
I am working on a bunch of known human SNPs, and I was wondering if there was any way to study if these SNPs are linked and might occur on the same haplotype in a non-random frequency. Is this type of study called Linkage Disequilibrium? How do I perform such a study, and am I missing data points?
Any help and/or pointers on this would really help me. Thank you in advance for your response.