I manage to run the sciClone script with the demo data from github. I now have the following error message after I ask to writeClusterTable(sc, "results/clusters1")
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
cannot open file 'results/clusters1': No such file or directory
Any suggestion on where the problem may be?
Thank in advance to anyone who can help me.