MG-RAST upload problem
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Entering edit mode
7.5 years ago
susan.klein ▴ 60

Hi,

anyone else have a problem with MG-RAST at the moment? They say they have fixed their upload problem but I cannot get it accept a metadata file.. Always get the error below. Anyone else have a similar problem? They don't seem to reply to their support email address (too busy with perplexed users I suppose!).

Thanks,
Theo

[error] Invald file format: /mcs/bio/mg-rast/uploads/43e799b5483e0a0b6269561aa085a008/metadata_spreadsheet_IC5BvVk.xls
Traceback (most recent call last):
  File "/mcs/bio/mg-rast/prod/pipeline/bin/validate_metadata", line 689, in 
    sys.exit(main(sys.argv))
  File "/mcs/bio/mg-rast/prod/pipeline/bin/validate_metadata", line 669, in main
    mdvalid = validate_mdraw(mdraw, opts.skip)
UnboundLocalError: local variable 'mdraw' referenced before assignment
metagenomics MG-RAST • 3.1k views
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Entering edit mode

I would try to debug the issue by uploading their metadata example. If that passes, the problem is on your end, if not, you have an additional argument for the problem on their end.

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