Get output for a list of Tracks & List of regions from UCSC table broswer
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9.8 years ago
vlaufer ▴ 290

I want to submit a list of regions like so

chr1:128060465-129060465
chr2:56405042-57405042
chr2:124946062-125946062
chr3:18012618-19012618
chr3:28933416-29933416
chr3:87628311-88628311
chr4:6118896-7118896
chr5:52963302-53963302
chr6:74879027-75879027
chr7:20046869-21046869
chr8:37676238-38676238
chr9:92438484-93438484
chr10:47539055-48539055
chr11:89244697-90244697
chr11:98556636-99556636
chr12:98090299-99090299
chr13:47426024-48426024

Into UCSC Table Browser. No problem, I just select "defined regions" under the regions: tab at https://genome.ucsc.edu/cgi-bin/hgTables

However, suppose in the group: tab I want to select all tracks of group "Regulation". Is there a way to do this, such that I can generate one file per track without having to manually select each track?

Thank you.

Batch Multiple TableBrowser UCSC • 1.6k views
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