Question: About gene expression heatmap
0
gravatar for Ginsea Chen
4.9 years ago by
Ginsea Chen120
Chinese Academy of Tropical Agricultural Sciences, Danzhou, China
Ginsea Chen120 wrote:

Hi 

Now I have a specific gene (coding sequences), I tried to draw the gene expression heatmap in different tissues of plants (whole genome information have been obtained). what should I do? such as which softwares should be use, and so on.

rna-seq R gene • 2.4k views
ADD COMMENTlink modified 4.9 years ago • written 4.9 years ago by Ginsea Chen120

Dear HG

Thanks for your help, software downloading.

ADD REPLYlink written 4.9 years ago by Ginsea Chen120
1
gravatar for xb
4.9 years ago by
xb400
Chapel Hill, NC,USA
xb400 wrote:

R heatmap.2 or Java TreeView

ADD COMMENTlink modified 4.9 years ago • written 4.9 years ago by xb400

Dear xb

Thanks for your answer, I think R heatmap.2 may be a good choice.

ADD REPLYlink written 4.9 years ago by Ginsea Chen120
0
gravatar for HG
4.9 years ago by
HG1.1k
Germany
HG1.1k wrote:

This also can be a good choice :

https://www.broadinstitute.org/cancer/software/GENE-E/

ADD COMMENTlink written 4.9 years ago by HG1.1k
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