Entering edit mode
10.3 years ago
jane.zh
▴
10
Hi, I am now doing some researches of resequencing. Now I've got a large amount of SNPs, and want to utilize them to identify candidate genes. But I am very confused of it. How can I select these candidate genes? With the help of Ensemble or David, or any other tools?
You need to elaborate your question or make it more clear. I quiet didn't get what you want to do?
I want to find positive select sweep, and locate some genes which participate in this positive selection. I've konown positons of SNPs, and I want to find those important genes through the information of these SNPs.
This paper might give you some helpful pointers:
Detecting Selective Sweeps from Pooled Next-Generation Sequencing Samples
Thank you very much!