Entering edit mode
9.8 years ago
xfliwz
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50
Hello, I am interested in system analysis ChIP-seq data (tfbs or histone). I wonder if I have several ChIP-seq data sets of transcription factors (TF) and histone modification, how can I integrate those ChIP-seq data information to uncover the under relationship of those TF or histone? Any suggestion will be welcome!
Thanks for your answer! It is very useful. ChromHMM is a powerful tools to do integrated analysis ChIP-seq data. You know that the parameter of state is user-defined. How could I know the value of state is suitable for my own data sets?