I installed pygr and its prerequisites.
>>> from pygr import worldbase
Where it was supposed to return
according to the documentation (root and version are empty).
Am I doing something wrong?
By the way, this package is five years old and nothing has been contributed to it since. Which leads me to wonder: is the worldbase database still maintained at UCLA?
For the curious, what I want to do next is:
hg17 = worldbase.Bio.Seq.Genome.HUMAN.hg17()
chr1 = hg17[’chr1’]