Off topic:Biopython Retrieving protein transcripts for a protein coding gene
0
0
Entering edit mode
9.8 years ago
azam.kenan • 0

Hi there,

I am using biopython's wrapper API for ncbi eutils to retrieve related proteins, identical proteins and variant proteins (transcripts, splice variants, etc) for a certain protein coding gene.

This information is displayed for a protein coding gene on its ncbi page under the "mRNA and Protein(s)" section

http://www.ncbi.nlm.nih.gov/gene/10555

I am retrieving identical proteins via LinkName=protein_protein_identical and related via LinkName=protein_protein

http://www.ncbi.nlm.nih.gov/protein?LinkName=protein_protein_identical&from_uid=69122971

Is there a way to retrieve the transcripts for a protein coding gene?

Thank you, K

biopython eutils • 1.9k views
ADD COMMENT
This thread is not open. No new answers may be added
Traffic: 1697 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6