Entering edit mode
9.8 years ago
AW
▴
350
Hi,
In the contig step of SOAPdenovo2, I see there is the following parameter:
-E (optional) merge clean bubble before iterate, works only if -M is set when using multi-kmer, [NO]
Can someone give me more detail about this parameter and how it impacts the genome assembly? What are the benefits of specifying E versus not?
Thanks
Alison
