Question: Do You Know Any People Doing Bioinformatics For Microbial Ecology Studies?
3
gravatar for Chris Evelo
7.4 years ago by
Chris Evelo9.9k
Maastricht, The Netherlands
Chris Evelo9.9k wrote:

Jonathan Eisen wants to compile a list of people doing bioinformatics for microbial ecology studies. Do you know any?

This was the original tweet.

If we get an interesting list of names here I will send the link to Jonathan.

Thanks for your help.

ADD COMMENTlink written 7.4 years ago by Chris Evelo9.9k
4
gravatar for Joseph Hughes
7.4 years ago by
Joseph Hughes2.6k
Scotland, UK
Joseph Hughes2.6k wrote:

Dr Chris Quince from the University of Glasgow does bioinformatics on NGS data to determine microbial communities link text

Dr David Bass from the Natural History Museum London works on the biodiversity, phylogeny, and ecology of protists using NGS and bioinformatics link text. (The question didn't specify whether it was only bacteria).

ADD COMMENTlink modified 7.4 years ago • written 7.4 years ago by Joseph Hughes2.6k

Yes Chris is an excellent statistical bioinformatician. I've collaborated with him, and I suppose I count too: http://biowiki.org/IanHolmes

ADD REPLYlink written 7.3 years ago by Ihh20
3
gravatar for Casey Bergman
7.4 years ago by
Casey Bergman17k
Athens, GA, USA
Casey Bergman17k wrote:

EDIT 1:

ADD COMMENTlink modified 7.4 years ago • written 7.4 years ago by Casey Bergman17k
3
gravatar for Curtis
7.3 years ago by
Curtis30
Curtis30 wrote:

(Warning: mild self-promotion)

  • [?]Curtis Huttenhower[?], [?]HUMAnN[?] and [?]LEfSe[?].
  • [?]Daniel Segre[?], metabolic interactions.
  • [?]Claus Wilke[?], adaptation and evolution.
  • [?]Chris Marx[?], systems biology.
  • [?]Dan Huson[?], [?]MEGAN[?] and [?]Metasim[?].
  • [?]Jeroen Raes[?], metabolic networks.
  • [?]Elhanan Borenstein[?], also metabolic networks (different flavor).
ADD COMMENTlink written 7.3 years ago by Curtis30
2
gravatar for Pierre Lindenbaum
7.4 years ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum115k wrote:

I attended a conference with Philippe VANDENKOORNHUYSE.

Scientific responsibilities

Environmental genomics facilities at University of Rennes I • Genomics platforms & facilities in Western France

Teaching responsibilities

Diploma in the field of Ecology and environmental sciences at OSU de Rennes (University of Rennes I)

ADD COMMENTlink written 7.4 years ago by Pierre Lindenbaum115k
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