I apologize in advance if this question is naive/simple. I am currently running the Open Babel command obspectrophore as follows:
obspectrophore -i tester.sdf
where tester.sdf is an SDF file generated from the following FASTA sequence:
Running the command above took 5+ minutes to complete. Is this normal or is there some way (using a different file format/modifying settings) that I can obtain faster spectrophore results?
Thanks in advance!