Question: Consensus gene set problem
gravatar for inayat45shaikh
5.7 years ago by
inayat45shaikh40 wrote:

Hello group,

i have predicted set of genes for large eukaryotic genome from ab initio (GlimmerHMM) and evidence (Exonerate) based approaches, now i want to make consensus gene sets from both the predictions. i am facing issues with GLEAN installation, as its installation manual doesn't provide detail on, how to create database of gff files. I have tried Evigan and Evidence Modeller, but couldn't succeed, Evigan was not working well with multifasta file (assembled contig file) and Evidence Modeller creating issues with the number of directories it produces on "Partition " step. is their any other user friendly software to do this or can any one give the detailed installation steps of GLEAN or how do i work with multifasta in Evigan and Evidence modeller.

......m stuck.........please Help :(


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ADD COMMENTlink modified 5.6 years ago by Biostar ♦♦ 20 • written 5.7 years ago by inayat45shaikh40
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