SOAPdenovo k-mer frequency cutoff
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9.7 years ago

Hi all,

i am trying to rum an assembly in SOAPdenovo, and now i am trying to understand what does the "-d" option means? The biggest -d i try , the smallest number of contigs i get which is good , but i don`t understant when do i stop to encrease the -d value?

THX fo help,

Assembly • 1.6k views
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