Question: [Cytoscape] Merge nodes by column/attribute
gravatar for enricoferrero
4.6 years ago by
United Kingdom
enricoferrero760 wrote:


I have a network of protein - protein interactions, where the primary IDs of the nodes are Uniprot IDs. Now, some proteins can have different Uniprot IDs but share the same Gene Symbol, which I'm storing as an attribute in another column.

How can I merge nodes based on the  value they have in the Gene Symbol attribute/column, while keeping all the edges of the original nodes?

I tried playing with Tools --> Merge --> Network but I can't get it to work (i.e.: nodes do not merge).

Any help is appreciated!


node cytoscape id merge • 1.8k views
ADD COMMENTlink written 4.6 years ago by enricoferrero760
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1016 users visited in the last hour