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9.6 years ago
mattbawn
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60
I have 17 SNP calls from Y-Chromosome NGS data. How do I go about trying to construct a phylogenic tree? I have created a script that has tabulated the data regularly as a .csv file containing the coordinates and the reference and alternate nucleotide for each sample. I was trying to use the SNPhylo pipeline but the documentation is rather sparse.
Any ideas, suggestions would be gratefully received.
Thanks,
Matt