Hi everyone. I'm trying to convert a GFF3 annotation file to GFF format, using the command lines below on rtracklayer package, but I'm not successfull. Does anyone could help me with this? I'm new on R.
annotation_path <- system.file("annotation", package = "rtracklayer") annotation_gff3 <- file.path(test_path, "TrireRUTC30_1_GeneCatalog_genes_20110526.fix2.gff3") test <- import(annotation_gff3) export(test,"annotation.gtf","gtf")
Thanks a lot!