Id be very grateful if someone could help answer my question.
I am interested as to how the flat
rd_len_cutoff works in the SOAPdenovo assembly process. It says it only uses the first * bps of each read. My max read is 100bp and minimum 37bp. Therefore, if I set
rd_len_cutoff = 100, will it only use 100bp reads OR everything as nothing is longer than 100bp?