Question: bowtie2 not found even if it is installed
0
gravatar for Parham
4.1 years ago by
Parham1.4k
Sweden
Parham1.4k wrote:

Hi,

I have bowtie2 installed on my ubuntu and when I try to map my reads with TopHat it says

bowtie 2 not found, checking for older version

What can be the source of the issue?

Thanks!

tophat bowtie2 • 2.0k views
ADD COMMENTlink written 4.1 years ago by Parham1.4k
5

Is it in your PATH? Presumably not.

ADD REPLYlink written 4.1 years ago by Devon Ryan85k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1144 users visited in the last hour