Question: Comparing the RNAseq analysis data
0
gravatar for prp291
4.7 years ago by
prp29150
United States
prp29150 wrote:

I am analyzing RNAseq data using CLC genome workbench. I am using the both available unigene build (because whole genome is not available) genome and assembled genome as a reference. I am always getting the less number of count fragment for my assembled genome in compare to unigene build. But number of contigs in assembled genome is high than unigene build. Can anyone suggest to improve my experiment?

denovo assembly rna-seq • 1.2k views
ADD COMMENTlink written 4.7 years ago by prp29150

Could you provide more information, possibly including numbers you are getting? I am not sure if I understand what you are asking.

ADD REPLYlink written 4.7 years ago by Biomonika (Noolean)3.0k
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