Entering edit mode
8.6 years ago
dvanic ▴ 250
I need a list of human/mouse splicing factors - what databases that are not abandonware do you use?
Thanks in advance!
PS I've found:
- SpliceAid 2: a database of human splicing factors expression data and RNA target motifs, which has 71 SF and was last updated in 2013 http://220.127.116.11/splicing_tissue.html
- SpliceFac, which seems to be abandonware http://rulai.cshl.edu/cgi-bin/SpliceFac/splicefac.cgi?process=home
- SpliceAid F which was published in 2013 and is already broken http://www.caspur.it/SpliceAidF/
Not all RBP involve in splicing, but https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3929597/ might be helpful. While it might a few years old, it's a pretty comprehensive study.
None of the links work. Any other suggestions?
Is there any new splicing factor database? Seem like there is not much update.