Is There A Way To Convert Gs Mapper Output To Bam File?
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10.7 years ago
Gabrielw ▴ 60

I'm trying to figure out if I can convert contigs fasta format generated by GS Mapper to bam file, can someone help me?

bam conversion sequencing • 2.3k views
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10.7 years ago
lexnederbragt ★ 1.3k

Starting from newbler version 2.6, gsMapper can output BAM files (using the -bam option on the command line).

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10.7 years ago

Googling your question returns a link to SeqAnswers.com : http://seqanswers.com/forums/showthread.php?t=2112

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