Floating point exception [somatic sniper v1.0.4]
0
0
Entering edit mode
9.4 years ago

Hello,

I am running somatic sniper version 1.0.4 and am getting the following error:

Preparing to snipe some somatics
Using prior probabilities
Normal bam is normal.bam
Tumor bam is tumor.bam
Floating point exception

I have aligned the data using novoalign and have done base quality recalibration and indel realignment using GATK. I can visualize the BAM files in IGV too. I am running it on a gene panel. I really hope if some one can help me with this.

Regards,
Rahul

software-error somaticsniper • 1.8k views
ADD COMMENT
0
Entering edit mode

An issue was filed by OP on the somatic-sniper GitHub issues page.

ADD REPLY

Login before adding your answer.

Traffic: 1780 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6