Geo: Finding Up- And Down-Regulated Genes In Gds Records

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12.6 years ago

Avoks ▴ 140

Hi,

I don’t even know if this is remotely possible but I just thought I should take a chance.On the GDS record pages in GEO, there is an analysis tools button. Clicking on this gives the option of finding genes that are up/down for the condition in the dataset, I believe.The result however does not indicate which is up- or down-regulated...at least I can’t seem to find where it shows that. Is it possible to somehow retrieve this information on up- and down-regulated genes with R?

Thanks.

Avoks

geo gene bioconductor • 2.7k views

ADD COMMENT • link updated 10.1 years ago by Biostar 20 • written 12.6 years ago by Avoks ▴ 140

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It seems you asked this question at BioC. Please indicate that you are cross-posting this question to other forums: http://permalink.gmane.org/gmane.science.biology.informatics.conductor/36653

ADD REPLY • link 12.6 years ago by Khader Shameer 18k

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Is there any update about this problem? Thank you.

ADD REPLY • link 9.4 years ago by Zhilong Jia ★ 2.2k

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