mmdiff RNAseq output

Question

[R]

Hi,

I have a question regarding mmdiff output!

1. feature_id: the name of the feature (e.g. Ensembl transcript ID)
2. bayes_factor: the Bayes factor in favour of the second model
3. posterior_probability: the posterior probability in favour of the second model (the prior probability is recorded in a # comment at the top of the file)
4. alpha0 and alpha1: estimated posterior mean of the global intercept for each model
5. beta0_0, beta0_1..., beta1_0, beta1_0: estimated posterior means of the regression coefficients of the model-independent covariate matrix M under each model
6. eta0_0, eta0_1..., eta1_0, eta1_1...: estimated posterior means of the regression coefficients of the model-dependent matrix P under each model
7. mu_sample1, mu_sample2,... sd_sample1, sd_sample2,...: the data, i.e. the posterior means and standard deviations used as the outcomes

If I want to compare 2 samples, how should I put a cutoff? (i.e. on which column(s))

Thank you very much