BamUtil for Base Qual Recalibration
0
0
Entering edit mode
9.5 years ago
Danielk ▴ 640

Hi all,

Does anyone have experience with or has benchmarked BamUtil for Base Quality Score Recalibration of NGS data? Looks like an interesting alternative to GATK.

Wiki: http://genome.sph.umich.edu/wiki/BamUtil:_recab

cheers

recalibration recal bqsr basequal gatk • 2.3k views
ADD COMMENT
0
Entering edit mode

This question is now 2.5 years old... With some hope : has anyone some information on performances of bamUtil compared to BQSR (not time performances but benchmarking or such) ? I would greatly appreciate any pointers!

ADD REPLY

Login before adding your answer.

Traffic: 2383 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6