Is it possible to get PFAM domain mapping for different isoforms of the same protein?
At Uniprot for example they report all positional data relative to their canonical isoform.
At PFAM, I found this proteome-file: ftp://ftp.ebi.ac.uk/pub/databases/Pfam/releases/Pfam27.0/proteomes/9606.tsv.gz. This file nevertheless seems to link the Uniprot identifiers - without specifying any isoform
So I am a bit stuck and don't know how to proceed. Or maybe I misunderstood something(s)?
Thanks for any additional info/help