I am running blastpgp using as query a .faa file containing around 31.000 seq. My db contains also more than 50000 seq, and I select -m 9 to have a tab del output. During the run I get the following error:
ERROR: ObjMgrNextAvailEntityID failed with idx 2048
but blast keeps running.
I read here that before blast+, this was an issue. I already had blast+, however I downloaded the lates version (2.2.30) re-installed and run it again. But still the same error.
Any idea hot to fix this?