Question: Retrieve SIFT results using python and web server
0
gravatar for nilus1432
5.9 years ago by
nilus143230
Singapore
nilus143230 wrote:

Hello Everyone,

I want to get results of SIFT from a set of aligned sequence using SIFT web server and python

SIFT site i am using is

http://sift.jcvi.org/www/SIFT_aligned_seqs_submit.html 

I want to submit several alignments to this server and get scaled probabilities for each alignment using Python.

How to do it using urllib2 or any other library.

Thanks

-nil

 

snp sequence alignment • 1.7k views
ADD COMMENTlink written 5.9 years ago by nilus143230

IIRC there's a way to install SIFT locally. Not sure if you can use urllib2 to bypass this method.

ADD REPLYlink written 5.9 years ago by _r_am31k
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