Retrieve SIFT results using python and web server
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6.6 years ago
nilus1432 ▴ 30

Hello Everyone,

I want to get results of SIFT from a set of aligned sequence using SIFT web server and python

SIFT site i am using is

http://sift.jcvi.org/www/SIFT_aligned_seqs_submit.html 

I want to submit several alignments to this server and get scaled probabilities for each alignment using Python.

How to do it using urllib2 or any other library.

Thanks

-nil

 

alignment SNP sequence • 1.9k views
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IIRC there's a way to install SIFT locally. Not sure if you can use urllib2 to bypass this method.

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