Question: how to convert the UCSC alignment chain file to read-able sequence file
1
lin.pei26 • 100 wrote:
Hi All:
I am looking for pairwise genomic alignment for human and mouse.
I was guided to UCSC http://hgdownload.cse.ucsc.edu/goldenPath/hg19/vsMm9/
but the chain file I found did not provide sequence-alignment directly.
Do I need to construct the sequence-level alignment from these chain file by other ways ?
Thanks in advance!
Best,