Question: (Closed) Multiple sequence alignment consensus sequence
0
gravatar for suhalsuhaimi
5.5 years ago by
suhalsuhaimi30
United States
suhalsuhaimi30 wrote:

 

Hi all..
How to get single common sequence from 100 protein sequences?
I already did multiple sequence alignment using clustal omeha, but then how to get the common sequence?

Is it possible?

clustal omega alignment gene • 4.8k views
ADD COMMENTlink modified 5.5 years ago by Michael Dondrup47k • written 5.5 years ago by suhalsuhaimi30

Please don't cross-post on here and SEQanswers.

ADD REPLYlink written 5.5 years ago by Devon Ryan95k

Ah, that's what's off with the header! How did I not realize that?!

ADD REPLYlink written 5.5 years ago by RamRS27k

I'm really sorry. I'm really new here. I just desperate to get an answer from those who are expert here. Please forgive me. My mistake. I will not do that again.

 

ADD REPLYlink written 5.5 years ago by suhalsuhaimi30

It's alright, no worries! All of us do that at least once when we're new. You might wanna check this out: Ten Simple Rules for Getting Help from Online Scientific Communities

ADD REPLYlink written 5.5 years ago by RamRS27k

I think that's something else, though I noticed it too.

ADD REPLYlink written 5.5 years ago by Devon Ryan95k

Ah, the post was copied from seqanswers and the new part of the header we see is from that.

ADD REPLYlink written 5.5 years ago by Devon Ryan95k

I'm sorry. My mistake. Will not happen again

ADD REPLYlink written 5.5 years ago by suhalsuhaimi30

Hello suhalsuhaimi!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

ADD REPLYlink written 5.5 years ago by Michael Dondrup47k
0
gravatar for RamRS
5.5 years ago by
RamRS27k
Houston, TX
RamRS27k wrote:

This might help: http://www.codoncode.com/aligner/sequence-assembly.htm

Also, the term you're looking for is "consensus sequence from MSA". Please try searching with that key phrase here as well as on Google. 

ADD COMMENTlink written 5.5 years ago by RamRS27k
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