Question: Reference genome in VCF format (gVCF)
0
gravatar for win
4.1 years ago by
win810
India
win810 wrote:

Hi all,

I want to know if its possible to generate a VCF file rather a gVCF file for a reference genome fasta file? I am trying some indexing, sorting and searching methods and wanted a reference file in VCF format. 

Thanks in advance.

vcf • 1.8k views
ADD COMMENTlink modified 4.1 years ago by Emily_Ensembl17k • written 4.1 years ago by win810
1
gravatar for Emily_Ensembl
4.1 years ago by
Emily_Ensembl17k
EMBL-EBI
Emily_Ensembl17k wrote:

VCF is a variant format, its job is to tell you what is different from the reference. A VCF of the reference would just be blank.

ADD COMMENTlink written 4.1 years ago by Emily_Ensembl17k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2423 users visited in the last hour