Question: Reactome FI constructing interacting network
gravatar for dharl
5.9 years ago by
dharl70 wrote:

I am very new to the Reactome database and Cytoscape. I wanted to build a directed human interactome network. I am just going through the tutorials and the plugin and having a and time getting through it... but if any one has already done this, it would be really great of you could share the information as to how to go about that. 


reactome fi • 1.3k views
ADD COMMENTlink written 5.9 years ago by dharl70

A directed interaction network implies A could interact with B while B does not interact with A. The words don't make sense together. A directed network would use some more precise verb than 'interact'.

ADD REPLYlink written 5.9 years ago by karl.stamm3.9k

Yes, You are precisely correct. And in some sense that is exactly what I am looking for too, but using reactome as my choice of database. 


ADD REPLYlink written 5.9 years ago by dharl70
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