Im trying to do a bedtools compare on a couple of bed files. One of the bed files keeps throwing this error:
Error: unable to open file or unable to determine types for file
My file is as follows:
I have checked that the start position is before the end position. I have added and removed column headings chrom, "start" and "end" (also tried 'chromStart' and 'chromEnd'. But no joy. I had originally created this bed file from a tab delimited file from R. Does anyone know what has gone wrong?