The HapMap data is pretty old and new genome build has changed.
Can we use the dbSNP records themselves to get a hapmap inventory alignment with the newest dbSNP build?
I see records like this:
VAL | validated=YES | min_prob=? | max_prob=? | notwithdrawn | byCluster | byFre
quency | byHapMap
if Hapmap Validated a snp, and its not retired does this indicate it was used by HapMap in a study? We're not concerned what phase of HapMap used the data... I hope that is not a problem ?
Thanks Jorge! Yes we're hoping for a GRCh37 version of hapmap, so the filtering should be appropriate...