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• Where to download earlier versions of GWAS Catalog?
  GWAS Catalog has moved to EMBL and currently the version on EMBL site has:   Catalog stats L...
• What is the difference between different releases of dbSNP?
  My question is really as simple as the title, but in particular, I'm interested in the following ...
• Updating rsids from one version of dbSNP to another
  Hi I am working on PharmGKB data. Which is on dbSNP version 147 while my vcfs are on dbSNP 150 v...
• What is dbsnp file and how can I find it?
  Hi, I want to call the variants of my samples from the bam file using [MuSE][1] and I need the ...
• dbSNP 144 for Annovar
  I am using annovar for human  genome annotation. I want to use dbSNP 144 as my alignment is on bu...
• Reference Index and Feature Index not matching while using BaseRecalibrator
  I have downloaded the databases for dbSNP and COSMIC in order to use the BaseRecalibrator tool in...
• Is rs# of an SNP comparable between genome version or build?
  Hi All, I am working on public genotype data in [opensnp][1]. I found that different platform (e...
• Effect of dbSNP build differences in variant calling
  I want to call variants on prealigned CRAM files for a 1000genomes sample, available for download...
• What Problems (If Any) Should I Expect When Combining Identifiers Based On Different Releases Of Dbsnp?
  hi, i'm pulling dbsnp ids (rsid) from two different datasets that use different versions of dbsnp...
• Which One Should I Use Hapmap Or 1000Genome Or Dbsnp?
  Hi, I have been trying to prepare a SNP file for my NGS analysis. Basically the file should have...
• Older Dbsnp Human Data
  Hi all, I am searching for an older dbSNP human build (130) in XML format. I have looked through...
• A strange problem with annotation of vcf file
  Hi friends, I did variant calling of a bam file (it's related to whole-genome sequencing of a hu...
• Rat Genome and dbsnp file
  From where can I download rat dbsnp and indels VCF file? I have the genome for Rattus norvegicus...
• dbSNP b126 in vcf format
  Hello everyone, I am trying to find dbSNP build 126 in vcf format so that I can use it to analyz...
• Can I use different versions of dbsnp for variant calling using GATK and variant annotation?
  Hello I am using the GATK pipeline to do variant calling from human patients. For the purpose o...
• Dbsnp Lengthtoolong
  I'm writing a small piece of software to determine which variants in a set of genomic variants ar...
• List Of Dbsnp Variants Where Reference Genome Has Minor Allele
  While working on a couple of exome projects, I've ran into situations where for some of the varia...